RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 TAP1Q03518 808 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 GRIN2CQ14957 1233 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 ECM1Q16610 540 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
CDH11-206ENST00000562998 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 ZNF410Q86VK4 478 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 MYOCDQ8IZQ8 938 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 ERMNQ8TAM6 284 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 SP7Q8TDD2 431 aaPredicted RBP20.85■□□□□ 0.93
CDH11-206ENST00000562998 PIGOQ8TEQ8 1089 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 DBR1Q9UK59 544 aaKnown RBP20.85■□□□□ 0.93
CDH11-206ENST00000562998 COL6A3P12111 3177 aa20.85■□□□□ 0.93
CDH11-206ENST00000562998 POLGP54098 1239 aaPredicted RBP20.84■□□□□ 0.93
CDH11-206ENST00000562998 DSC3Q14574 896 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 EMC2Q15006 297 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 ODR4Q5SWX8 454 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 POTEGQ6S5H5 508 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 DTHD1Q6ZMT9 781 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 NACC1Q96RE7 527 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 CDX2Q99626 313 aaPredicted RBP20.84■□□□□ 0.93
CDH11-206ENST00000562998 MMTAG2Q9BU76 263 aaKnown RBP20.84■□□□□ 0.93
CDH11-206ENST00000562998 RC3H2Q9HBD1 1191 aaKnown RBP20.84■□□□□ 0.93
CDH11-206ENST00000562998 INSL6Q9Y581 213 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 STK24Q9Y6E0 443 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 TRANK1O15050 2925 aa20.84■□□□□ 0.93
CDH11-206ENST00000562998 A0A087WWV3 80 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 STX6O43752 255 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 DGAT1O75907 488 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 NFX1Q12986 1120 aaKnown RBP20.83■□□□□ 0.93
CDH11-206ENST00000562998 PPP2R2DQ66LE6 453 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 HAUS3Q68CZ6 603 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 KSR1Q8IVT5 923 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
CDH11-206ENST00000562998 TMEM143Q96AN5 459 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 ZNF668Q96K58 619 aaPredicted RBP20.83■□□□□ 0.93
CDH11-206ENST00000562998 RAB34Q9BZG1 259 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 IFT122Q9HBG6 1241 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 RGS18Q9NS28 235 aa20.83■□□□□ 0.93
CDH11-206ENST00000562998 A0A087WZ62 844 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 PP2D1A8MPX8 630 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 RHPN2Q8IUC4 686 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 TCP11Q8WWU5 503 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 NLRP7Q8WX94 980 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 PSPC1Q8WXF1 523 aaKnown RBP20.82■□□□□ 0.92
CDH11-206ENST00000562998 ZNF689Q96CS4 500 aaPredicted RBP20.82■□□□□ 0.92
CDH11-206ENST00000562998 MTRQ99707 1265 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 FDXACB1Q9BRP7 624 aaPredicted RBP20.82■□□□□ 0.92
CDH11-206ENST00000562998 ZBED2Q9BTP6 218 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 STXBP5LQ9Y2K9 1186 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 COL4A3BPQ9Y5P4 624 aa20.82■□□□□ 0.92
CDH11-206ENST00000562998 C9IYK1 514 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 ASAP2O43150 1006 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 BMP15O95972 392 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 ARL2P36404 184 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 CCT6AP40227 531 aaKnown RBP20.81■□□□□ 0.92
CDH11-206ENST00000562998 FAM189BP81408 668 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 LAMTOR4Q0VGL1 99 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 HYIQ5T013 277 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 FAM117BQ6P1L5 589 aa20.81■□□□□ 0.92
CDH11-206ENST00000562998 GCOM2Q9BZD3 368 aaPredicted RBP20.81■□□□□ 0.92
CDH11-206ENST00000562998 LINC01553A4QN01 128 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 CDC25AP30304 524 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 POU5F1BQ06416 359 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 PTPAQ15257 358 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 SF3A1Q15459 793 aaKnown RBP20.8■□□□□ 0.92
CDH11-206ENST00000562998 SPRED2Q7Z698 418 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 NPAS4Q8IUM7 802 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 SNX29Q8TEQ0 813 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 ADAM2Q99965 735 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 ATP6V0A4Q9HBG4 840 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 C1orf112Q9NSG2 853 aa20.8■□□□□ 0.92
CDH11-206ENST00000562998 BMP2KQ9NSY1 1161 aaPredicted RBP20.8■□□□□ 0.92
CDH11-206ENST00000562998 CSDE1O75534 798 aaKnown RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 DGKIO75912 1065 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 UPP2O95045 317 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 LINC00271P0C7V0 271 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 SARSP49591 514 aaKnown RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 MXD4Q14582 209 aaPredicted RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 KRT79Q5XKE5 535 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 FAM173BQ6P4H8 233 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 SLC24A5Q71RS6 500 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 IFNLR1Q8IU57 520 aaPredicted RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 MYLIPQ8WY64 445 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 NLRP4Q96MN2 994 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 INO80BQ9C086 356 aaPredicted RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 ZSCAN16Q9H4T2 348 aaPredicted RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 CLIC4Q9Y696 253 aa20.79■□□□□ 0.92
CDH11-206ENST00000562998 MORC2Q9Y6X9 1032 aaPredicted RBP20.79■□□□□ 0.92
CDH11-206ENST00000562998 MYO9BQ13459 2157 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 VWA3AA6NCI4 1184 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 PDIA4P13667 645 aaKnown RBP20.78■□□□□ 0.92
CDH11-206ENST00000562998 FGFR4P22455 802 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 ERVK-21P61565 698 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 KCTD17Q8N5Z5 321 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 ASAP3Q8TDY4 903 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 AK8Q96MA6 479 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 PRDM12Q9H4Q4 367 aa20.78■□□□□ 0.92
CDH11-206ENST00000562998 MINDY3Q9H8M7 445 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms