RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ARHGAP6O43182 974 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 TGM5O43548 720 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 FOXD2O60548 495 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 FSBPO95073 299 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 ITGB3P05106 788 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 XPAP23025 273 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 RPS19P39019 145 aaKnown RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 RGS3P49796 1198 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 NFKB2Q00653 900 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 STRN3Q13033 797 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 PCOLCEQ15113 449 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 TBC1D10BQ4KMP7 808 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 HS1BP3Q53T59 392 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 AGBL4Q5VU57 503 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 RNF219Q5W0B1 726 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 FERMT3Q86UX7 667 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 CIR1Q86X95 450 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 RTF1Q92541 710 aaKnown RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 DYDC2Q96IM9 177 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 ADAM7Q9H2U9 754 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 NELFAQ9H3P2 528 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 SEMA4AQ9H3S1 761 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 POLR3BQ9NW08 1133 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 H2AFY2Q9P0M6 372 aaPredicted RBP4.11□□□□□ -1.75
CHD9-207ENST00000562806 MSRAQ9UJ68 235 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 NR2E1Q9Y466 385 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 NUMBLQ9Y6R0 609 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 DUSP10Q9Y6W6 482 aa4.11□□□□□ -1.75
CHD9-207ENST00000562806 NEMP1O14524 444 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 PRICKLE3O43900 615 aaPredicted RBP4.1□□□□□ -1.75
CHD9-207ENST00000562806 KDM1AO60341 852 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 APOL3O95236 402 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 MRE11P49959 708 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 NRG3P56975 720 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 MYBPC3Q14896 1274 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 NOLC1Q14978 699 aaKnown RBP eCLIP4.1□□□□□ -1.75
CHD9-207ENST00000562806 SKOR2Q2VWA4 1001 aaPredicted RBP4.1□□□□□ -1.75
CHD9-207ENST00000562806 SPATS1Q496A3 300 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 BROXQ5VW32 411 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 IQSEC1Q6DN90 963 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 FILIP1Q7Z7B0 1213 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 SPATS2Q86XZ4 545 aaKnown RBP4.1□□□□□ -1.75
CHD9-207ENST00000562806 CDYL2Q8N8U2 506 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 ATL2Q8NHH9 583 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 SLC7A6OSQ96CW6 309 aaPredicted RBP4.1□□□□□ -1.75
CHD9-207ENST00000562806 WDR92Q96MX6 357 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 LMF1Q96S06 567 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 MYL10Q9BUA6 226 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 BDH2Q9BUT1 245 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 HAPLN2Q9GZV7 340 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 POFUT1Q9H488 388 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 MTG2Q9H4K7 406 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 CDC42EP3Q9UKI2 254 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 MYPNQ86TC9 1320 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 SBNO2Q9Y2G9 1366 aa4.1□□□□□ -1.75
CHD9-207ENST00000562806 ADAMTS20P59510 1910 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 OPHN1O60890 802 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 CNOT4O95628 575 aaKnown RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 ZNF888P0CJ79 500 aaPredicted RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 MTHFD2P13995 350 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 CR2P20023 1033 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 GAGE13Q4V321 117 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 GPR155Q7Z3F1 870 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 CXorf67Q86X51 503 aaPredicted RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 CHST13Q8NET6 341 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 WDR66Q8TBY9 1149 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 RABGGTAQ92696 567 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 GCDHQ92947 438 aaPredicted RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 NEIL1Q96FI4 390 aaPredicted RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 BORCS6Q96GS4 357 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 RAX2Q96IS3 184 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 RBM15Q96T37 977 aaKnown RBP eCLIP4.09□□□□□ -1.75
CHD9-207ENST00000562806 NOL10Q9BSC4 688 aaKnown RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 SLC6A15Q9H2J7 730 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 C14orf93Q9H972 538 aaKnown RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 PPP4R1LQ9P1A2 415 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 OAZ3Q9UMX2 235 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 CTDP1Q9Y5B0 961 aaPredicted RBP4.09□□□□□ -1.75
CHD9-207ENST00000562806 PCDHB6Q9Y5E3 794 aa4.09□□□□□ -1.75
CHD9-207ENST00000562806 MTSS1O43312 755 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 EYA4O95677 639 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 STAT5BP51692 787 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 RRADP55042 308 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 STAT4Q14765 748 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 FSCN1Q16658 493 aaKnown RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 FAM180AQ6UWF9 173 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 LARP4Q71RC2 724 aaKnown RBP eCLIP4.08□□□□□ -1.76
CHD9-207ENST00000562806 HDGFL2Q7Z4V5 671 aaPredicted RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 NECAB2Q7Z6G3 386 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 GLB1L2Q8IW92 636 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 UNC5BQ8IZJ1 945 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 UBR7Q8N806 425 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 GIMAP8Q8ND71 665 aaPredicted RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 OR14C36Q8NHC7 312 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 NKD2Q969F2 451 aaPredicted RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 ZNF496Q96IT1 587 aaPredicted RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 CDK5RAP1Q96SZ6 601 aaKnown RBP4.08□□□□□ -1.76
CHD9-207ENST00000562806 BRINP2Q9C0B6 783 aa4.08□□□□□ -1.76
CHD9-207ENST00000562806 PUS7LQ9H0K6 701 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms