RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 SNX27Q96L92 541 aa17.08■□□□□ 0.32
KLHDC4-208ENST00000562261 ELAC1Q9H777 363 aaKnown RBP17.08■□□□□ 0.32
KLHDC4-208ENST00000562261 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
KLHDC4-208ENST00000562261 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
KLHDC4-208ENST00000562261 ORC3Q9UBD5 711 aaPredicted RBP17.08■□□□□ 0.32
KLHDC4-208ENST00000562261 TMEM150BA6NC51 233 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 GRXCR2A6NFK2 248 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 DNAJB1P25685 340 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 FAM189BP81408 668 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 HYAL1Q12794 435 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 PIK3AP1Q6ZUJ8 805 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 SPPL3Q8TCT6 385 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 WASF1Q92558 559 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 ZNF668Q96K58 619 aaPredicted RBP17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 KCNMB3Q9NPA1 279 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
KLHDC4-208ENST00000562261 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 CCNT1O60563 726 aaKnown RBP17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 FGFR1P11362 822 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 DARSP14868 501 aaKnown RBP17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 LTBRP36941 435 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 PSMC5P62195 406 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 DRP2Q13474 957 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 ME3Q16798 604 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 SPOUT1Q5T280 376 aaKnown RBP17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 POF1BQ8WVV4 589 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 NLRP7Q8WX94 980 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 SH2D3AQ9BRG2 576 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 VAV3Q9UKW4 847 aa17.06■□□□□ 0.32
KLHDC4-208ENST00000562261 IGKV6-21A0A0C4DH24 114 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 DDX11L8A8MPP1 907 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 EML1O00423 815 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 LARGE1O95461 756 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 FDPSP14324 419 aaKnown RBP17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 GTF2F1P35269 517 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■□ 23.7
KLHDC4-208ENST00000562261 EARS2Q5JPH6 523 aaKnown RBP17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 ANO5Q75V66 913 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 GTF3C6Q969F1 213 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 PPP2R3CQ969Q6 453 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 NAP1L4Q99733 375 aaKnown RBP17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 TYW1Q9NV66 732 aaKnown RBP17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 PCDHB12Q9Y5F1 795 aa17.05■□□□□ 0.32
KLHDC4-208ENST00000562261 PRR33A8MZF0 331 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 TBX3O15119 743 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 HOXA2O43364 376 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 FGFR4P22455 802 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 IRS1P35568 1242 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 KRT2P35908 639 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 DNM2P50570 870 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 CDC42EP1Q00587 391 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 HAS1Q92839 578 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 GCOM2Q9BZD3 368 aaPredicted RBP17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 TMEM117Q9H0C3 514 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 IGFLR1Q9H665 355 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 CWH43Q9H720 699 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 FAM50BQ9Y247 325 aa17.04■□□□□ 0.32
KLHDC4-208ENST00000562261 DKC1O60832 514 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■■■■□ 24.5
KLHDC4-208ENST00000562261 MAFO75444 373 aaPredicted RBP17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 P4HBP07237 508 aaKnown RBP17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 LAG3P18627 525 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 UBE3AQ05086 875 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 DLX2Q07687 328 aaPredicted RBP17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 NR5A1Q13285 461 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 PLA2G4FQ68DD2 849 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 ADGRD2Q7Z7M1 963 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 GJD3Q8N144 294 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 NSUN7Q8NE18 718 aaKnown RBP17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 CYP26B1Q9NR63 512 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 SUCLA2Q9P2R7 463 aaPredicted RBP17.03■□□□□ 0.32
KLHDC4-208ENST00000562261 A0A087WZ62 844 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 A0A0U1RQF3 1178 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 FAM205CA6NFA0 338 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 LINC01565O15544 149 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 MARCH6O60337 910 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 TBX10O75333 385 aa17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 CSDE1O75534 798 aaKnown RBP17.02■□□□□ 0.32
KLHDC4-208ENST00000562261 FGF18O76093 207 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms