RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FAM237AA0A1B0GTK4 181 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 E9PMD0 336 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 VTNP04004 478 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 CTSHP09668 335 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 UBA7P41226 1012 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 KRT85P78386 507 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 SHHQ15465 462 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 LRIT3Q3SXY7 679 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 ZNF365Q70YC5 407 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 METTL13Q8N6R0 699 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 MCPH1Q8NEM0 835 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 TCP11Q8WWU5 503 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 APBB2Q92870 758 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 UBE2OQ9C0C9 1292 aaKnown RBP14.94□□□□□ -0.02
CDH1-204ENST00000562118 BHMT2Q9H2M3 363 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 AGO3Q9H9G7 860 aaKnown RBP14.94□□□□□ -0.02
CDH1-204ENST00000562118 IFT122Q9HBG6 1241 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
CDH1-204ENST00000562118 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 DNM3Q9UQ16 869 aa14.94□□□□□ -0.02
CDH1-204ENST00000562118 CHD7Q9P2D1 2997 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 A0A087WWV3 80 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 A0A087X0B3 334 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 ASAP2O43150 1006 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 DARSP14868 501 aaKnown RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 PLCG1P19174 1290 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 GUCY2CP25092 1073 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 DNM2P50570 870 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 NLRP11P59045 1033 aaKnown RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 MAPK7Q13164 816 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 KARSQ15046 597 aaKnown RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 E2F4Q16254 413 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 KIZQ2M2Z5 673 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 RINT1Q6NUQ1 792 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 DAW1Q8N136 415 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 CRIPAKQ8N1N5 446 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 PRPF31Q8WWY3 499 aaKnown RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 PSPC1Q8WXF1 523 aaKnown RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 CHAMP1Q96JM3 812 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 TIPINQ9BVW5 301 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 SCAND2PQ9GZW5 306 aaPredicted RBP14.93□□□□□ -0.02
CDH1-204ENST00000562118 SUGCTQ9HAC7 445 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 ERVK-5Q9HDB9 667 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 STK17AQ9UEE5 414 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 AKT3Q9Y243 479 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 COL4A3BPQ9Y5P4 624 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 CDH23Q9H251 3354 aa14.93□□□□□ -0.02
CDH1-204ENST00000562118 ABHD14A-ACY1A0A1B0GW23 586 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 ARHGEF35A5YM69 484 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 M0QZ92 97 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 EFCAB14O75071 495 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 FGBP02675 491 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 ACRP10323 421 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 GHRP10912 638 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 GLRA2P23416 452 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
CDH1-204ENST00000562118 TMEM62Q0P6H9 643 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 LAMTOR4Q0VGL1 99 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 MXD4Q14582 209 aaPredicted RBP14.92□□□□□ -0.02
CDH1-204ENST00000562118 ARSHQ5FYA8 562 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 SPECC1Q5M775 1068 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 RESP18Q5W5W9 173 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 CDCA2Q69YH5 1023 aaPredicted RBP14.92□□□□□ -0.02
CDH1-204ENST00000562118 DEFB128Q7Z7B8 93 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 FAM228AQ86W67 206 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 DBF4BQ8NFT6 615 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 ASAP3Q8TDY4 903 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 RAD54LQ92698 747 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 TMEM143Q96AN5 459 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 CALML4Q96GE6 196 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 OSMRQ99650 979 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 RUSC1Q9BVN2 902 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 IFIH1Q9BYX4 1025 aaKnown RBP14.92□□□□□ -0.02
CDH1-204ENST00000562118 TMX1Q9H3N1 280 aa14.92□□□□□ -0.02
CDH1-204ENST00000562118 CXXC1Q9P0U4 656 aaPredicted RBP14.92□□□□□ -0.02
CDH1-204ENST00000562118 TRANK1O15050 2925 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 USO1O60763 962 aaKnown RBP14.91□□□□□ -0.02
CDH1-204ENST00000562118 PLA2G4BP0C869 781 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 CAPSQ13938 189 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 DSC3Q14574 896 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 PCBP1Q15365 356 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDH1-204ENST00000562118 ADALQ6DHV7 355 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 LINC01599Q8WXQ3 324 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 SEPT8Q92599 483 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
CDH1-204ENST00000562118 PADI3Q9ULW8 664 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 HPSEQ9Y251 543 aa14.91□□□□□ -0.02
CDH1-204ENST00000562118 NOC2LQ9Y3T9 749 aaKnown RBP14.91□□□□□ -0.02
CDH1-204ENST00000562118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 A0A1W2PQ27 194 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 A0A1W2PQ64 194 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 A0A1W2PQD8 194 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 ACTN1P12814 892 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 CD52P31358 61 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 ZNF131P52739 623 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 PTENP60484 403 aa14.9□□□□□ -0.02
CDH1-204ENST00000562118 WDR5P61964 334 aaKnown RBP14.9□□□□□ -0.02
CDH1-204ENST00000562118 FOXD4L6Q3SYB3 417 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms