RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PDIA5Q14554 519 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 KSR1Q8IVT5 923 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 EXOC8Q8IYI6 725 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 LINC01599Q8WXQ3 324 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 MTRQ99707 1265 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 FTHL17Q9BXU8 183 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 CHD7Q9P2D1 2997 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 VWA3AA6NCI4 1184 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 GPR182O15218 404 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 SLC34A2O95436 690 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 CDC25AP30304 524 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 ECM1Q16610 540 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 FAM173BQ6P4H8 233 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 TMX1Q9H3N1 280 aa22.21■■□□□ 1.15
TSPAN3-210ENST00000561277 A0A087WZ62 844 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 LCHNA4D1U4 455 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 ENPP3O14638 875 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 USO1O60763 962 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 CSDE1O75534 798 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 DARSP14868 501 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 IBSPP21815 317 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 EIF4BP23588 611 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 ODR4Q5SWX8 454 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 ZNF710Q8N1W2 664 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 PSPC1Q8WXF1 523 aaKnown RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 GUCD1Q96NT3 240 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 NACC1Q96RE7 527 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 FDXACB1Q9BRP7 624 aaPredicted RBP22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 ATP6V0A4Q9HBG4 840 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 COL4A3BPQ9Y5P4 624 aa22.2■■□□□ 1.14
TSPAN3-210ENST00000561277 GAS2O43903 313 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 FGFR4P22455 802 aa22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 SF3A1Q15459 793 aaKnown RBP22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 KRT79Q5XKE5 535 aa22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 TOP1MTQ969P6 601 aa22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 RAD9AQ99638 391 aa22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 GCOM2Q9BZD3 368 aaPredicted RBP22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 XPNPEP1Q9NQW7 623 aa22.19■■□□□ 1.14
TSPAN3-210ENST00000561277 DENND3A2RUS2 1198 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 DGAT1O75907 488 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 ARHGEF15O94989 841 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 XRCC6P12956 609 aaKnown RBP eCLIP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 CDC42EP1Q00587 391 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 GRIN2CQ14957 1233 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 ARL6IP4Q66PJ3 421 aaKnown RBP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 RTN4RL1Q86UN2 441 aaPredicted RBP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 TCP11Q8WWU5 503 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 PRPF31Q8WWY3 499 aaKnown RBP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 YME1L1Q96TA2 773 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 DDX19AQ9NUU7 478 aaKnown RBP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 DBR1Q9UK59 544 aaKnown RBP22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 KIAA1024Q9UPX6 916 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 STK24Q9Y6E0 443 aa22.18■■□□□ 1.14
TSPAN3-210ENST00000561277 MGEA5O60502 916 aa22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 ZRSR1Q15695 479 aaKnown RBP22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 FOXD4L5Q5VV16 416 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 MAEAQ7L5Y9 396 aa22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 ZNF410Q86VK4 478 aa22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 FOXD4L4Q8WXT5 416 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 CDX2Q99626 313 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 TSPYL2Q9H2G4 693 aaPredicted RBP22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 CERS4Q9HA82 394 aa22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 INSL6Q9Y581 213 aa22.17■■□□□ 1.14
TSPAN3-210ENST00000561277 ARHGEF35A5YM69 484 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 BMP15O95972 392 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 SRGAP2CP0DJJ0 459 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 CEBPZQ03701 1054 aaKnown RBP22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 LAMTOR4Q0VGL1 99 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 ADAM2Q99965 735 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 ZSCAN16Q9H4T2 348 aaPredicted RBP22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 CLIC4Q9Y696 253 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 COL6A3P12111 3177 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 EYSQ5T1H1 3165 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 MUTP22033 750 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 SPRED2Q7Z698 418 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 MYLIPQ8WY64 445 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 MMTAG2Q9BU76 263 aaKnown RBP22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 PRDM12Q9H4Q4 367 aa22.16■■□□□ 1.14
TSPAN3-210ENST00000561277 HTRA4P83105 476 aaPredicted RBP22.15■■□□□ 1.14
TSPAN3-210ENST00000561277 TAP1Q03518 808 aa22.15■■□□□ 1.14
TSPAN3-210ENST00000561277 RNF149Q8NC42 400 aa22.15■■□□□ 1.14
TSPAN3-210ENST00000561277 BHMT2Q9H2M3 363 aa22.15■■□□□ 1.14
TSPAN3-210ENST00000561277 GPRC5CQ9NQ84 441 aa22.15■■□□□ 1.14
TSPAN3-210ENST00000561277 SFPQP23246 707 aaKnown RBP eCLIP22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 PADI6Q6TGC4 694 aa22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 INO80BQ9C086 356 aaPredicted RBP22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 POLR3FQ9H1D9 316 aaPredicted RBP22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 IFT122Q9HBG6 1241 aa22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 RGS18Q9NS28 235 aa22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 TTC3P53804 2025 aa22.14■■□□□ 1.13
TSPAN3-210ENST00000561277 LINC01553A4QN01 128 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 E9PMD0 336 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 GRIN1Q05586 938 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 MXD4Q14582 209 aaPredicted RBP22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 NPAS4Q8IUM7 802 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 ASAP3Q8TDY4 903 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 ARNTL2Q8WYA1 636 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 PLIN2Q99541 437 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 C1orf112Q9NSG2 853 aa22.13■■□□□ 1.13
TSPAN3-210ENST00000561277 MTUS1Q9ULD2 1270 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms