RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 LRRC41Q15345 812 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 PPP1R7Q15435 360 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 VWA3BQ502W6 1294 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 PRR16Q569H4 304 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEBQ6S5H4 581 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 CPLX4Q7Z7G2 160 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 MYOCDQ8IZQ8 938 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 RAPGEF5Q92565 580 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 LENG9Q96B70 501 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 TLR10Q9BXR5 811 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 PRR12Q9ULL5 1215 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 PLAGL2Q9UPG8 496 aa15.17■□□□□ 0.02
RABGGTA-220ENST00000560998 COL4A5P29400 1685 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CLRN2A0PK11 232 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 SPDYE3A6NKU9 549 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 H0YGN5 161 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 MED24O75448 989 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 RAD17O75943 681 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ANP32DO95626 131 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 TAL1P17542 331 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 GUCY2FP51841 1108 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 KIF11P52732 1056 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ZNF268Q14587 947 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM26FQ5R3K3 315 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 SPICE1Q8N0Z3 855 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 PCMTD1Q96MG8 357 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 PSMD1Q99460 953 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 TSG101Q99816 390 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ISCUQ9H1K1 167 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 NFS1Q9Y697 457 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CES2O00748 559 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CIITAP33076 1130 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ECE1P42892 770 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 DLGAP5Q15398 846 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 MAN2A1Q16706 1144 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 KIAA0753Q2KHM9 967 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CCDC38Q502W7 563 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 KIAA1755Q5JYT7 1200 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 GPBP1Q86WP2 473 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CCDC65Q8IXS2 484 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 SMCR8Q8TEV9 937 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 TBC1D31Q96DN5 1066 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CHMP6Q96FZ7 201 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 ARHGEF10LQ9HCE6 1279 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 PCDHA2Q9Y5H9 948 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
RABGGTA-220ENST00000560998 SMCHD1A6NHR9 2005 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM86B1E9PN63 330 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 IRF6O14896 467 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 ASAP2O43150 1006 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM86B2P0C5J1 330 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 CYP11B2P19099 503 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 HSD17B3P37058 310 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 ZNF844Q08AG5 666 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 IFI16Q16666 785 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 POLD4Q9HCU8 107 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 SIK3Q9Y2K2 1263 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 TMX2Q9Y320 296 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 NPHP3-ACAD11A0A0J9YXS1 232 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEFA5A3E0 1075 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 SKAP2O75563 359 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 CCND1P24385 295 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 LMNB2Q03252 620 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 BLMHQ13867 455 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 SPDYCQ5MJ68 293 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 KIRREL3Q8IZU9 778 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 TEX9Q8N6V9 391 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 FAM20AQ96MK3 541 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 PDGFDQ9GZP0 370 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
RABGGTA-220ENST00000560998 CYP3A4P08684 503 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 NEFHP12036 1026 aa15.14■□□□□ 0.01
RABGGTA-220ENST00000560998 CXCR5P32302 372 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms