RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ADAM2Q99965 735 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 PHF20Q9BVI0 1012 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 RGS18Q9NS28 235 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 NOC2LQ9Y3T9 749 aaKnown RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 C9IYK1 514 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 FGF18O76093 207 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 MRE11P49959 708 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 DUSP6Q16828 381 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 ALYREFQ86V81 257 aaKnown RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 CKAP2LQ8IYA6 745 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 LRRC43Q8N309 656 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 COLGALT1Q8NBJ5 622 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 PPP1R16BQ96T49 567 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 TLE6Q9H808 572 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
TPM1-227ENST00000560970 TMEM161AQ9NX61 479 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
TPM1-227ENST00000560970 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 HOXA2O43364 376 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 ST18O60284 1047 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 VTNP04004 478 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 CYP3A4P08684 503 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 FGFR1P11362 822 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 CBX2Q14781 532 aaPredicted RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 EARS2Q5JPH6 523 aaKnown RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 MCTP2Q6DN12 878 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 PDE12Q6L8Q7 609 aaKnown RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 EDAQ92838 391 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 LENG9Q96B70 501 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 ZSCAN31Q96LW9 406 aaPredicted RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 MAP7D2Q96T17 732 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 ATP6V0A4Q9HBG4 840 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 LZTS1Q9Y250 596 aa12.1□□□□□ -0.47
TPM1-227ENST00000560970 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
TPM1-227ENST00000560970 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 FSCN2O14926 492 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 DHX15O43143 795 aaKnown RBP12.09□□□□□ -0.47
TPM1-227ENST00000560970 PSAPP07602 524 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
TPM1-227ENST00000560970 ATP4AP20648 1035 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 CIITAP33076 1130 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 PPM1AP35813 382 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 CLCN3P51790 818 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 NR5A1Q13285 461 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 BMP8AQ7Z5Y6 402 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
TPM1-227ENST00000560970 METTL13Q8N6R0 699 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 WASF1Q92558 559 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 TNFRSF25Q93038 417 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 PHF7Q9BWX1 381 aaPredicted RBP12.09□□□□□ -0.47
TPM1-227ENST00000560970 TMEM117Q9H0C3 514 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 CDHR5Q9HBB8 845 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 ENTPD7Q9NQZ7 604 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
TPM1-227ENST00000560970 ZDBF2Q9HCK1 2354 aa12.08□□□□□ -0.47
TPM1-227ENST00000560970 TMEM221A6NGB7 291 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 WDR64B1ANS9 1081 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 M0R296 226 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 GPR32O75388 356 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 TDP2O95551 362 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 RBM10P98175 930 aaKnown RBP12.08□□□□□ -0.48
TPM1-227ENST00000560970 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 DSC3Q14574 896 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 PRR16Q569H4 304 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 GALNT17Q6IS24 598 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
TPM1-227ENST00000560970 ABI1Q8IZP0 508 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 SUSD6Q92537 303 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 MRPS27Q92552 414 aaKnown RBP12.08□□□□□ -0.48
TPM1-227ENST00000560970 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms