RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 KSR1Q8IVT5 923 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 ERMNQ8TAM6 284 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 SLC7A3Q8WY07 619 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 TMEM143Q96AN5 459 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 RAD9AQ99638 391 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 ARID2Q68CP9 1835 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 CDH23Q9H251 3354 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 TLL1O43897 1013 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 CA3P07451 260 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 CDC25AP30304 524 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 CDC42EP1Q00587 391 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 TAP1Q03518 808 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 NFX1Q12986 1120 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 GRIN2CQ14957 1233 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 PTPAQ15257 358 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 FAM117BQ6P1L5 589 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 FAM43BQ6ZT52 329 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 EXOC8Q8IYI6 725 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 NACC1Q96RE7 527 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 IFT122Q9HBG6 1241 aa17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 BMP2KQ9NSY1 1161 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-213ENST00000560856 A0A087WZ62 844 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 GPR182O15218 404 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 GAS2O43903 313 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 CSDE1O75534 798 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 DGAT1O75907 488 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 ARL2P36404 184 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 SF3A1Q15459 793 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 SPRED2Q7Z698 418 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 RHPN2Q8IUC4 686 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 FDXACB1Q9BRP7 624 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 SLC28A3Q9HAS3 691 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 RC3H2Q9HBD1 1191 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 COL4A3BPQ9Y5P4 624 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 CLIC4Q9Y696 253 aa17.02■□□□□ 0.32
SNRPA1-213ENST00000560856 UPP2O95045 317 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 FGFR4P22455 802 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 FAM189BP81408 668 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 GRIN1Q05586 938 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 LAMTOR4Q0VGL1 99 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 HYIQ5T013 277 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 PSPC1Q8WXF1 523 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 MTRQ99707 1265 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 ADAM2Q99965 735 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 RAB34Q9BZG1 259 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 KIAA1024Q9UPX6 916 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 INSL6Q9Y581 213 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 STK24Q9Y6E0 443 aa17.01■□□□□ 0.31
SNRPA1-213ENST00000560856 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 C9IYK1 514 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 ASAP2O43150 1006 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 BMP15O95972 392 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 PPP2R2DQ66LE6 453 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 KCNK18Q7Z418 384 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 PNMA5Q96PV4 448 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 GCOM2Q9BZD3 368 aaPredicted RBP17■□□□□ 0.31
SNRPA1-213ENST00000560856 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
SNRPA1-213ENST00000560856 MINDY3Q9H8M7 445 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 ATP6V0A4Q9HBG4 840 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
SNRPA1-213ENST00000560856 COL4A6Q14031 1691 aa17■□□□□ 0.31
SNRPA1-213ENST00000560856 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 CYP11B2P19099 503 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 SARSP49591 514 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 GRB10Q13322 594 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 KRT79Q5XKE5 535 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 PADI6Q6TGC4 694 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 SPRYD3Q8NCJ5 442 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 NLRP4Q96MN2 994 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 MORC2Q9Y6X9 1032 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-213ENST00000560856 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 EPOPA6NHQ4 379 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 E9PMD0 336 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 DGKIO75912 1065 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 SRGAP2CP0DJJ0 459 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 GLRA2P23416 452 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 PTENP60484 403 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 POU5F1BQ06416 359 aa16.98■□□□□ 0.31
SNRPA1-213ENST00000560856 PKP1Q13835 747 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms