RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PTGDRQ13258 359 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 BTG3Q14201 252 aaPredicted RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 RTN4RL1Q86UN2 441 aaPredicted RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 NPAS4Q8IUM7 802 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 FIBCD1Q8N539 461 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 FBXO22Q8NEZ5 403 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 PIGOQ8TEQ8 1089 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 GDPD5Q8WTR4 605 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 PSPC1Q8WXF1 523 aaKnown RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 LINC01599Q8WXQ3 324 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 TMEM143Q96AN5 459 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 CEP89Q96ST8 783 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 MTRQ99707 1265 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 FDXACB1Q9BRP7 624 aaPredicted RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 C17orf80Q9BSJ5 609 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 PPME1Q9Y570 386 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 PCDHB7Q9Y5E2 793 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 ADGRA3Q8IWK6 1321 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 A0A087WWV3 80 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 IGKV6-21A0A0C4DH24 114 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 VPS37CA5D8V6 355 aaPredicted RBP14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 EPOPA6NHQ4 379 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 MGEA5O60502 916 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 DARSP14868 501 aaKnown RBP14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 SARSP49591 514 aaKnown RBP14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 EMC2Q15006 297 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 PAN2Q504Q3 1202 aaKnown RBP14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 RILPL1Q5EBL4 403 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 HAUS3Q68CZ6 603 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 SLC24A5Q71RS6 500 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 KSR1Q8IVT5 923 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 TCP11Q8WWU5 503 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 RAB34Q9BZG1 259 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 INO80BQ9C086 356 aaPredicted RBP14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 C1orf112Q9NSG2 853 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 COL4A3BPQ9Y5P4 624 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 CHD7Q9P2D1 2997 aa14.47□□□□□ -0.09
CTDSPL2-209ENST00000560620 GAS2O43903 313 aaKnown RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 DGKIO75912 1065 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 SRGAP2CP0DJJ0 459 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 SFPQP23246 707 aaKnown RBP eCLIP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 TOB1P50616 345 aaPredicted RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 ERVK-21P61565 698 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 GRB10Q13322 594 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 SKIV2LQ15477 1246 aaKnown RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 FAM43BQ6ZT52 329 aaPredicted RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 ZNF410Q86VK4 478 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 CATSPER3Q86XQ3 398 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 RNF169Q8NCN4 708 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 SP7Q8TDD2 431 aaPredicted RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 PRPF31Q8WWY3 499 aaKnown RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 DHX33Q9H6R0 707 aaKnown RBP14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 TUFT1Q9NNX1 390 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 RGS18Q9NS28 235 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 ANKEF1Q9NU02 776 aa14.46□□□□□ -0.09
CTDSPL2-209ENST00000560620 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 LAD1O00515 517 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 MED24O75448 989 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 LYPLA2O95372 231 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 PDCP20941 246 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 CTNNB1P35222 781 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 CCT6AP40227 531 aaKnown RBP14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 TTC3P53804 2025 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 LAMTOR4Q0VGL1 99 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 CUL4AQ13619 759 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 EPC2Q52LR7 807 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 SPOUT1Q5T280 376 aaKnown RBP14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 DTHD1Q6ZMT9 781 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 MAEAQ7L5Y9 396 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 CATSPER4Q7RTX7 472 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 TMEM192Q8IY95 271 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 SAMD11Q96NU1 681 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 NACC1Q96RE7 527 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 ATP6V0A4Q9HBG4 840 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
CTDSPL2-209ENST00000560620 C9IYK1 514 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 DGAT1O75907 488 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 SPATA31C1P0DKV0 1188 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 RPA1P27694 616 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 RARRES1P49788 294 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 ABI1Q8IZP0 508 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 C4orf32Q8N8J7 132 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 RNF149Q8NC42 400 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 SNX29Q8TEQ0 813 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 POLR3CQ9BUI4 534 aaPredicted RBP14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 DACT1Q9NYF0 836 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 PIN4Q9Y237 131 aaKnown RBP14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 RWDD3Q9Y3V2 267 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 MTCH2Q9Y6C9 303 aa14.44□□□□□ -0.1
CTDSPL2-209ENST00000560620 COL4A4P53420 1690 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms