RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
SPG21-211ENST00000560564 NECAB3Q96P71 396 aaPredicted RBP18.19■□□□□ 0.5
SPG21-211ENST00000560564 LMAN2LQ9H0V9 348 aa18.19■□□□□ 0.5
SPG21-211ENST00000560564 DENND3A2RUS2 1198 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 TNFRSF10AO00220 468 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 QARSP47897 775 aaKnown RBP18.18■□□□□ 0.5
SPG21-211ENST00000560564 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
SPG21-211ENST00000560564 TCEAL5Q5H9L2 206 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 FAM102BQ5T8I3 360 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 NSUN3Q9H649 340 aaKnown RBP18.18■□□□□ 0.5
SPG21-211ENST00000560564 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
SPG21-211ENST00000560564 P4HBP07237 508 aaKnown RBP18.17■□□□□ 0.5
SPG21-211ENST00000560564 EPHA7Q15375 998 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 PLA2G4FQ68DD2 849 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
SPG21-211ENST00000560564 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 RNF19AQ9NV58 838 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 LIMCH1Q9UPQ0 1083 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 PCDHB7Q9Y5E2 793 aa18.17■□□□□ 0.5
SPG21-211ENST00000560564 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 ITGB1P05556 798 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 DNAJB1P25685 340 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 NPEPPSP55786 919 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 NAALADL2Q58DX5 795 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 C4orf19Q8IY42 314 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 SLFN12Q8IYM2 578 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 ZNF579Q8NAF0 562 aaKnown RBP18.16■□□□□ 0.5
SPG21-211ENST00000560564 NEK9Q8TD19 979 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 LXNQ9BS40 222 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
SPG21-211ENST00000560564 RGL1Q9NZL6 768 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 HCSTQ9UBK5 93 aa18.16■□□□□ 0.5
SPG21-211ENST00000560564 FGFR1P11362 822 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 FGFR4P22455 802 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 FOSBP53539 338 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 LEXMQ3ZCV2 418 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 KLHL23Q8NBE8 558 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 IL27Q8NEV9 243 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 SPPL3Q8TCT6 385 aa18.15■□□□□ 0.5
SPG21-211ENST00000560564 PABPC5Q96DU9 382 aaKnown RBP18.15■□□□□ 0.5
SPG21-211ENST00000560564 LLPHQ9BRT6 129 aaKnown RBP18.15■□□□□ 0.5
SPG21-211ENST00000560564 DHX33Q9H6R0 707 aaKnown RBP18.15■□□□□ 0.5
SPG21-211ENST00000560564 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
SPG21-211ENST00000560564 A0A087WZ62 844 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 DKC1O60832 514 aaKnown RBP eCLIP18.14■□□□□ 0.49
SPG21-211ENST00000560564 CSDE1O75534 798 aaKnown RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 IBSPP21815 317 aaPredicted RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 KCNA5P22460 613 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 CDC42EP1Q00587 391 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 ZNF598Q86UK7 904 aaKnown RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 ZNF410Q86VK4 478 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 DYDC2Q96IM9 177 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 FDXACB1Q9BRP7 624 aaPredicted RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 ATP6V0A4Q9HBG4 840 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 SUCLA2Q9P2R7 463 aaPredicted RBP18.14■□□□□ 0.49
SPG21-211ENST00000560564 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
SPG21-211ENST00000560564 A0A0U1RQF3 1178 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 TBKBP1A7MCY6 615 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 ZBTB39O15060 712 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 SLITRK3O94933 977 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 YWHABP31946 246 aaKnown RBP18.13■□□□□ 0.49
SPG21-211ENST00000560564 LTBRP36941 435 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
SPG21-211ENST00000560564 CYP4A11Q02928 519 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 HYAL1Q12794 435 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 CALCRLQ16602 461 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 ECHDC2Q86YB7 292 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 CASD1Q96PB1 797 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 GCOM2Q9BZD3 368 aaPredicted RBP18.13■□□□□ 0.49
SPG21-211ENST00000560564 CWH43Q9H720 699 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 IFT122Q9HBG6 1241 aa18.13■□□□□ 0.49
SPG21-211ENST00000560564 NEMFO60524 1076 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
SPG21-211ENST00000560564 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
SPG21-211ENST00000560564 IRS1P35568 1242 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 DNM2P50570 870 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 TRIM29Q14134 588 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
SPG21-211ENST00000560564 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 LRRC55Q6ZSA7 311 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 CEP170P1Q96L14 293 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 SCLT1Q96NL6 688 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 JPH2Q9BR39 696 aaPredicted RBP18.12■□□□□ 0.49
SPG21-211ENST00000560564 TRAIPQ9BWF2 469 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 TMEM117Q9H0C3 514 aa18.12■□□□□ 0.49
SPG21-211ENST00000560564 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms