RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SLC12A7Q9Y666 1083 aa20.24■□□□□ 0.83
TSPAN3-208ENST00000560514 DMDP11532 3685 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 C22orf31O95567 290 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 EOMESO95936 686 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 CCNE2O96020 404 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 IGHDP01880 384 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 TMOD1P28289 359 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 NAPAP54920 295 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 GIT2Q14161 759 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 ZNF710Q8N1W2 664 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 SCLT1Q96NL6 688 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 RTP3Q9BQQ7 232 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 ANO3Q9BYT9 981 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
TSPAN3-208ENST00000560514 MEIS1O00470 390 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 STK25O00506 426 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 MAGEB2O15479 319 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 AOC1P19801 751 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 RFX1P22670 979 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 ADCY7P51828 1080 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 NLRP11P59045 1033 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 ANGPT1Q15389 498 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 CABP7Q86V35 215 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 TEX2Q8IWB9 1127 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 VPS52Q8N1B4 723 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 RIC8AQ9NPQ8 531 aa20.22■□□□□ 0.83
TSPAN3-208ENST00000560514 DCHS1Q96JQ0 3298 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CARNS1A5YM72 827 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 ZBTB42B2RXF5 422 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 NT5C1B-RDH14C9J2C7 533 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 SH2B2O14492 632 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CHMLP26374 656 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 BCAR1P56945 870 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 TDGQ13569 410 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CLLU1OSQ5K130 101 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CWF19L1Q69YN2 538 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CCDC149Q6ZUS6 474 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 TMTC3Q6ZXV5 915 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 NIPA1Q7RTP0 329 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 OTOP3Q7RTS5 596 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 PLA2G4DQ86XP0 818 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 CCDC105Q8IYK2 499 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 FANCBQ8NB91 859 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 HELQQ8TDG4 1101 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 YTHDC1Q96MU7 727 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 DACT1Q9NYF0 836 aa20.21■□□□□ 0.83
TSPAN3-208ENST00000560514 EPCAMP16422 314 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 LIFRP42702 1097 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 CLCN3P51790 818 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 AP3B2Q13367 1082 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 EFCAB12Q6NXP0 572 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 TMC5Q6UXY8 1006 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 DTWD2Q8NBA8 298 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 GLT8D2Q9H1C3 349 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-208ENST00000560514 GVINP1Q7Z2Y8 2422 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 A0A0U1RQF3 1178 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 IPO5O00410 1097 aaKnown RBP20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 ZC3H11AO75152 810 aaKnown RBP eCLIP20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 PSAPP07602 524 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 ATP4AP20648 1035 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 SREBF1P36956 1147 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 KANK3Q6NY19 840 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 MICU3Q86XE3 530 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 SIX5Q8N196 739 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 AUTS2Q8WXX7 1259 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 MAP4K1Q92918 833 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 FAM167AQ96KS9 214 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 SFXN1Q9H9B4 322 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 DUSP12Q9UNI6 340 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 SAMM50Q9Y512 469 aa20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 MAFBQ9Y5Q3 323 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-208ENST00000560514 SMCO2A6NFE2 343 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 PI15O43692 258 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 CTSAP10619 480 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 POLGP54098 1239 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 DGLUCYQ7Z3D6 616 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 SMAP1Q8IYB5 467 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 RSPH1Q8WYR4 309 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 TBC1D22BQ9NU19 505 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 IRAK3Q9Y616 596 aa20.18■□□□□ 0.82
TSPAN3-208ENST00000560514 SGSM2O43147 1006 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 LMNAP02545 664 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 ZNF746Q6NUN9 644 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 DDX53Q86TM3 631 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 LRRC71Q8N4P6 559 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 NLRP7Q8WX94 980 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms