RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 SCN5AQ14524 2016 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 TMEM150BA6NC51 233 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 ACRP10323 421 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 KCNJ6P48051 423 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 NLRP11P59045 1033 aaKnown RBP15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 CEBPZQ03701 1054 aaKnown RBP15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 PAK2Q13177 524 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 TFDP1Q14186 410 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 SKOR2Q2VWA4 1001 aaPredicted RBP15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 DBF4BQ8NFT6 615 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 ZBTB10Q96DT7 871 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 GCOM2Q9BZD3 368 aaPredicted RBP15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 SCAND2PQ9GZW5 306 aaPredicted RBP15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 ADAMTS10Q9H324 1103 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 SLC4A7Q9Y6M7 1214 aa15.54■□□□□ 0.08
PKNOX1-209ENST00000560448 SIP14410 1827 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 CUTAO60888 179 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 VTNP04004 478 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 GHRP10912 638 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 CYP11B2P19099 503 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 EIF4BP23588 611 aaKnown RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 MARCKSP29966 332 aaPredicted RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 SMAD3P84022 425 aaKnown RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 LPIN1Q14693 890 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 TMEM119Q4V9L6 283 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 HABP4Q5JVS0 413 aaKnown RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 C9orf50Q5SZB4 431 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 GPR153Q6NV75 609 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 SRGAP1Q7Z6B7 1085 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 NLRP7Q8WX94 980 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 CHAMP1Q96JM3 812 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 SCLT1Q96NL6 688 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 PYM1Q9BRP8 204 aaKnown RBP15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 BHMT2Q9H2M3 363 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 C17orf75Q9HAS0 396 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 STK17AQ9UEE5 414 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 PHLPP2Q6ZVD8 1323 aa15.53■□□□□ 0.08
PKNOX1-209ENST00000560448 PP2D1A8MPX8 630 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 ZBTB39O15060 712 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 DARSP14868 501 aaKnown RBP15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 SFPQP23246 707 aaKnown RBP eCLIP15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 CDC25AP30304 524 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 TMEM62Q0P6H9 643 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 ECM1Q16610 540 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 KIZQ2M2Z5 673 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 RHPN2Q8IUC4 686 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 KIFAP3Q92845 792 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 OSMRQ99650 979 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 SH2D3AQ9BRG2 576 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 XPNPEP1Q9NQW7 623 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 RCOR1Q9UKL0 485 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 GINS2Q9Y248 185 aa15.52■□□□□ 0.08
PKNOX1-209ENST00000560448 ZBBXA8MT70 800 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 AMHP03971 560 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 DEKP35659 375 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 ARL2P36404 184 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 GRB10Q13322 594 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 SYT2Q8N9I0 419 aaPredicted RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 TET1Q8NFU7 2136 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 C1orf112Q9NSG2 853 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 TFIP11Q9UBB9 837 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 PADI3Q9ULW8 664 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 TMEM265A0A087WTH1 108 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 SCP2P22307 547 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 PHKA2P46019 1235 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 WDR5P61964 334 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 DNM1Q05193 864 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 LAMTOR4Q0VGL1 99 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 DRP2Q13474 957 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 RSPH1Q8WYR4 309 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 SYMPKQ92797 1274 aaKnown RBP15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 TMEM143Q96AN5 459 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 PNMA5Q96PV4 448 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 ERVK-5Q9HDB9 667 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 CHST12Q9NRB3 414 aa15.51■□□□□ 0.07
PKNOX1-209ENST00000560448 MICAL3Q7RTP6 2002 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 A0A087WZ62 844 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 E9PMD0 336 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 ATP2A2P16615 1042 aaKnown RBP15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 CD52P31358 61 aa15.5■□□□□ 0.07
PKNOX1-209ENST00000560448 NAMPTP43490 491 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms