RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 APOBEC3FQ8IUX4 373 aaKnown RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 C4orf19Q8IY42 314 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 FAM186BQ8IYM0 893 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 TBC1D5Q92609 795 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 SLC35C1Q96A29 364 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 FIZ1Q96SL8 496 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 SENP7Q9BQF6 1050 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 LXNQ9BS40 222 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 ANKEF1Q9NU02 776 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 TRIM10Q9UDY6 481 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 L1RE1Q9UN81 338 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 FRMD4BQ9Y2L6 1034 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 CTDP1Q9Y5B0 961 aaPredicted RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 ARID2Q68CP9 1835 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 RSPH10B2B2RC85 870 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 C19orf81C9J6K1 198 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 DHX15O43143 795 aaKnown RBP10.61□□□□□ -0.71
RTF1-206ENST00000560447 STAM2O75886 525 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 FLOT1O75955 427 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 AKAP3O75969 853 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 PLEKP08567 350 aaPredicted RBP10.61□□□□□ -0.71
RTF1-206ENST00000560447 RSPH10BP0C881 870 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 ITGB5P18084 799 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 PON1P27169 355 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 PAFAH1B1P43034 410 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 QARSP47897 775 aaKnown RBP10.61□□□□□ -0.71
RTF1-206ENST00000560447 NPEPPSP55786 919 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 JAM2P57087 298 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 RAD51AP2Q09MP3 1159 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 MIGA2Q7L4E1 593 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
RTF1-206ENST00000560447 GPRASP2Q96D09 838 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 MTFR1LQ9H019 292 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 C17orf75Q9HAS0 396 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 NLRC4Q9NPP4 1024 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 KCNH7Q9NS40 1196 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 USP20Q9Y2K6 914 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 CD2APQ9Y5K6 639 aa10.61□□□□□ -0.71
RTF1-206ENST00000560447 COL11A1P12107 1806 aaPredicted RBP10.61□□□□□ -0.71
RTF1-206ENST00000560447 MACROD2A1Z1Q3 448 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 ATP2A1O14983 1001 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 STAT1P42224 750 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 PSEN2P49810 448 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 CETN1Q12798 172 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 ODR4Q5SWX8 454 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 SMYD5Q6GMV2 418 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
RTF1-206ENST00000560447 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 IRF2BP2Q7Z5L9 587 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 NLRX1Q86UT6 975 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 CREG2Q8IUH2 290 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 PIGOQ8TEQ8 1089 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 KCNN1Q92952 543 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 CDHR1Q96JP9 859 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 PKNOX2Q96KN3 472 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 AGBL1Q96MI9 1066 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 OSBPL9Q96SU4 736 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 MMS19Q96T76 1030 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 STK33Q9BYT3 514 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 AGPAT3Q9NRZ7 376 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 FBXO28Q9NVF7 368 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 NENFQ9UMX5 172 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 CAPN6Q9Y6Q1 641 aa10.6□□□□□ -0.71
RTF1-206ENST00000560447 NFASCO94856 1347 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 WDR64B1ANS9 1081 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 TK2O00142 265 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 FZD9O00144 591 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 NFKBIEO00221 500 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 ENC1O14682 589 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 CHMP2AO43633 222 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 HIP1RO75146 1068 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 MOCS3O95396 460 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 KRT13P13646 458 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 PLS3P13797 630 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 VCAM1P19320 739 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 LMNB1P20700 586 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 FMO5P49326 533 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 RARRES1P49788 294 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 BACE1P56817 501 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 PSMC5P62195 406 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 GTF2BQ00403 316 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 RASSF7Q02833 373 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 GFPT1Q06210 699 aaPredicted RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 MAPK7Q13164 816 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 MTMR1Q13613 665 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 PGM5Q15124 567 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms