RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 DMXL1Q9Y485 3027 aa10.57□□□□□ -0.72
SMAD3-215ENST00000560424 ZNF292O60281 2723 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 NARSO43776 548 aaKnown RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 DCNP07585 359 aaKnown RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 KLRC1P26715 233 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 LMNB2Q03252 620 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 TRDNQ13061 729 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 RNF20Q5VTR2 975 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 KANK3Q6NY19 840 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 USP17L6PQ6QN14 398 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 PLPPR4Q7Z2D5 763 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 POTEDQ86YR6 584 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 SLC39A11Q8N1S5 342 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 STAMQ92783 540 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 CASD1Q96PB1 797 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 OSMRQ99650 979 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 SEC63Q9UGP8 760 aaKnown RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-215ENST00000560424 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
SMAD3-215ENST00000560424 ACACBO00763 2458 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 KRBA1A5PL33 1030 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 CARNS1A5YM72 827 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 SPDYE3A6NKU9 549 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 NT5C1B-RDH14C9J2C7 533 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 BACH1O14867 736 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 SPTLC1O15269 473 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 MAFGO15525 162 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 ARP10275 920 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 SLC26A2P50443 739 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 CRYBB1P53674 252 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-215ENST00000560424 FAM189BP81408 668 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 PTH1RQ03431 593 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 GRM4Q14833 912 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 KIZQ2M2Z5 673 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 LETM2Q2VYF4 491 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 ELMSAN1Q6PJG2 1045 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 GPR149Q86SP6 731 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 FAM228AQ86W67 206 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 TMEM40Q8WWA1 233 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 AUTS2Q8WXX7 1259 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 BORCS6Q96GS4 357 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 RTKNQ9BST9 563 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 USP18Q9UMW8 372 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 RBM8AQ9Y5S9 174 aaKnown RBP10.55□□□□□ -0.72
SMAD3-215ENST00000560424 CEP250Q9BV73 2442 aa10.55□□□□□ -0.72
SMAD3-215ENST00000560424 KMT2BQ9UMN6 2715 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-215ENST00000560424 PIK3CDO00329 1044 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 HBP1O60381 514 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 ZC3H11AO75152 810 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMAD3-215ENST00000560424 SRFP11831 508 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 ITGB5P18084 799 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 KLRC2P26717 231 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 MCM2P49736 904 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 BCAR1P56945 870 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 DMWDQ09019 674 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 KRT32Q14532 448 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 FAM160B1Q5W0V3 765 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 DENND4AQ7Z401 1863 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 SUMF1Q8NBK3 374 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
SMAD3-215ENST00000560424 PCYT2Q99447 389 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 CDHR5Q9HBB8 845 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 JADE2Q9NQC1 790 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
SMAD3-215ENST00000560424 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
SMAD3-215ENST00000560424 COL1A2P08123 1366 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 DCDC2BA2VCK2 349 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 IFIT3O14879 490 aaKnown RBP10.53□□□□□ -0.72
SMAD3-215ENST00000560424 LAMTOR5O43504 91 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 CYTH3O43739 400 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 ADRB1P08588 477 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 CTSAP10619 480 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 POLGP54098 1239 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-215ENST00000560424 ACTR2P61160 394 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
SMAD3-215ENST00000560424 PTPN14Q15678 1187 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 CREB3L3Q68CJ9 461 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 PHLDB3Q6NSJ2 640 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 C15orf39Q6ZRI6 1047 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 ECHDC2Q86YB7 292 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 CKAP2LQ8IYA6 745 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 KIAA0319LQ8IZA0 1049 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 HELQQ8TDG4 1101 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 GPR152Q8TDT2 470 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 RSAD2Q8WXG1 361 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 SHDQ96IW2 340 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 SCLT1Q96NL6 688 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 PSTPIP2Q9H939 334 aa10.53□□□□□ -0.72
SMAD3-215ENST00000560424 SPATA6Q9NWH7 488 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms