RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 EMC2Q15006 297 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 FAM102BQ5T8I3 360 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 CABP7Q86V35 215 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 FAM228AQ86W67 206 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 HERC6Q8IVU3 1022 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 RASSF8Q8NHQ8 419 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 ZNF396Q96N95 335 aaPredicted RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 MTRQ99707 1265 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 MMTAG2Q9BU76 263 aaKnown RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 PBX4Q9BYU1 374 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 GCOM2Q9BZD3 368 aaPredicted RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 BHMT2Q9H2M3 363 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 DHX33Q9H6R0 707 aaKnown RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 CERS4Q9HA82 394 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 DNM3Q9UQ16 869 aa9.53□□□□□ -0.88
USP3-217ENST00000560070 YBX2Q9Y2T7 364 aaKnown RBP9.53□□□□□ -0.88
USP3-217ENST00000560070 GPR182O15218 404 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 TLL1O43897 1013 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 MGEA5O60502 916 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 BAIAP3O94812 1187 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 BMP15O95972 392 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 F13A1P00488 732 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 RPLP2P05387 115 aaKnown RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 XRCC6P12956 609 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP3-217ENST00000560070 DARSP14868 501 aaKnown RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 LIG1P18858 919 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 DNAJB2P25686 324 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 UBA7P41226 1012 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 RAD51AP2Q09MP3 1159 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 GRB10Q13322 594 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 STK38Q15208 465 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 PTPAQ15257 358 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 LONRF3Q496Y0 759 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 ARL6IP4Q66PJ3 421 aaKnown RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 HAUS3Q68CZ6 603 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 KCNK18Q7Z418 384 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 EXOC8Q8IYI6 725 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 DEFB123Q8N688 67 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 ASAP3Q8TDY4 903 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 TCP11Q8WWU5 503 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 TIFAQ96CG3 184 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 PNMA5Q96PV4 448 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 ADAM2Q99965 735 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 POLR3FQ9H1D9 316 aaPredicted RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 TMX1Q9H3N1 280 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 SEMA6BQ9H3T3 888 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 ERVK-5Q9HDB9 667 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 DBR1Q9UK59 544 aaKnown RBP9.52□□□□□ -0.89
USP3-217ENST00000560070 COL4A3BPQ9Y5P4 624 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 MYH6P13533 1939 aa9.52□□□□□ -0.89
USP3-217ENST00000560070 NPHP3-ACAD11A0A0J9YXS1 232 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 DENND3A2RUS2 1198 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 SFI1A8K8P3 1242 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 DGAT1O75907 488 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 NCLP19338 710 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 EIF4BP23588 611 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 LONP1P36776 959 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 SLC39A14Q15043 492 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 KARSQ15046 597 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 CATSPER4Q7RTX7 472 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 RNF149Q8NC42 400 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 RNF169Q8NCN4 708 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 APBB2Q92870 758 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 CALML4Q96GE6 196 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 SLC28A3Q9HAS3 691 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 FBXO2Q9UK22 296 aaPredicted RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 ZDHHC9Q9Y397 364 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 SRPRBQ9Y5M8 271 aaKnown RBP9.51□□□□□ -0.89
USP3-217ENST00000560070 FRMPD3Q5JV73 1810 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 KDM3AQ9Y4C1 1321 aa9.51□□□□□ -0.89
USP3-217ENST00000560070 LCHNA4D1U4 455 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 LRRIQ4A6NIV6 560 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 RFXAPO00287 272 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 SPTLC2O15270 562 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ASAP2O43150 1006 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 EFCAB14O75071 495 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ARHGEF15O94989 841 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 EYA4O95677 639 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 CA3P07451 260 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 PLA2G4BP0C869 781 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ZSCAN20P17040 1043 aaPredicted RBP9.5□□□□□ -0.89
USP3-217ENST00000560070 CYP11B2P19099 503 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 GLRA2P23416 452 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ARL2P36404 184 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 GATMP50440 423 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 CDC42EP1Q00587 391 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms