RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SMIM35A0A1B0GVV1 85 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 PRR23AA6NEV1 266 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 RXRAP19793 462 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 NME8Q8N427 588 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 ADAM2Q99965 735 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 RNF26Q9BY78 433 aaPredicted RBP23.15■■□□□ 1.3
PSEN1-225ENST00000560005 PSTPIP2Q9H939 334 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 JADE2Q9NQC1 790 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 CDH22Q9UJ99 828 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 TCHHQ07283 1943 aa23.15■■□□□ 1.3
PSEN1-225ENST00000560005 DENND3A2RUS2 1198 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 DEXIO95424 95 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.29
PSEN1-225ENST00000560005 MTMR3Q13615 1198 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 TRIM29Q14134 588 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 UBE2SQ16763 222 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 TMEM105Q8N8V8 129 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 RASGRP4Q8TDF6 673 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 TCF25Q9BQ70 676 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 ENTPD7Q9NQZ7 604 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 RGS18Q9NS28 235 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 C1orf112Q9NSG2 853 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 SLC9A2Q9UBY0 812 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 NOC2LQ9Y3T9 749 aaKnown RBP23.14■■□□□ 1.29
PSEN1-225ENST00000560005 NR2E1Q9Y466 385 aa23.14■■□□□ 1.29
PSEN1-225ENST00000560005 HIDE1A8MVS5 230 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 FGFR1P11362 822 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 XBP1P17861 261 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 SMARCA1P28370 1054 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 NBL1P41271 181 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 MTHFD1LQ6UB35 978 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 SLC24A5Q71RS6 500 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 UBALD2Q8IYN6 164 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 TMEM40Q8WWA1 233 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 MRPS27Q92552 414 aaKnown RBP23.13■■□□□ 1.29
PSEN1-225ENST00000560005 CWH43Q9H720 699 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 CDHR5Q9HBB8 845 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 RNF216Q9NWF9 866 aaPredicted RBP23.13■■□□□ 1.29
PSEN1-225ENST00000560005 SORCS3Q9UPU3 1222 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 LZTS1Q9Y250 596 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 WDR87Q6ZQQ6 2873 aa23.13■■□□□ 1.29
PSEN1-225ENST00000560005 GVINP1Q7Z2Y8 2422 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 C9IYK1 514 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 MAFGO15525 162 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 PRPF3O43395 683 aaKnown RBP23.12■■□□□ 1.29
PSEN1-225ENST00000560005 HOXB8P17481 243 aaPredicted RBP23.12■■□□□ 1.29
PSEN1-225ENST00000560005 LAG3P18627 525 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 STAT5BP51692 787 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 ACTR2P61160 394 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 TMTC3Q6ZXV5 915 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 PLPPR4Q7Z2D5 763 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 SLC26A6Q9BXS9 759 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 SMOC2Q9H3U7 446 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 PUF60Q9UHX1 559 aaKnown RBP23.12■■□□□ 1.29
PSEN1-225ENST00000560005 ST3GAL5Q9UNP4 418 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 MYO10Q9HD67 2058 aa23.12■■□□□ 1.29
PSEN1-225ENST00000560005 SPDYE3A6NKU9 549 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 C2CD4DB7Z1M9 353 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 PLCB3Q01970 1234 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 SKOR2Q2VWA4 1001 aaPredicted RBP23.11■■□□□ 1.29
PSEN1-225ENST00000560005 FOXD4L5Q5VV16 416 aaPredicted RBP23.11■■□□□ 1.29
PSEN1-225ENST00000560005 FBXO18Q8NFZ0 1043 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 FOXD4L4Q8WXT5 416 aaPredicted RBP23.11■■□□□ 1.29
PSEN1-225ENST00000560005 ATP6V0A4Q9HBG4 840 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 KCNH7Q9NS40 1196 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 PCDHA6Q9UN73 950 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 PCDHA8Q9Y5H6 950 aa23.11■■□□□ 1.29
PSEN1-225ENST00000560005 PLEKHA8P1O95397 391 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 KLRC1P26715 233 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 ATL3Q6DD88 541 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 CMTR1Q8N1G2 835 aaKnown RBP23.1■■□□□ 1.29
PSEN1-225ENST00000560005 SDF4Q9BRK5 362 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 POMKQ9H5K3 350 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 NGRNQ9NPE2 291 aaKnown RBP23.1■■□□□ 1.29
PSEN1-225ENST00000560005 TMEM161AQ9NX61 479 aa23.1■■□□□ 1.29
PSEN1-225ENST00000560005 FAM43BQ6ZT52 329 aaPredicted RBP23.09■■□□□ 1.29
PSEN1-225ENST00000560005 KIAA0319LQ8IZA0 1049 aa23.09■■□□□ 1.29
PSEN1-225ENST00000560005 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
PSEN1-225ENST00000560005 SRBD1Q8N5C6 995 aaKnown RBP23.09■■□□□ 1.29
PSEN1-225ENST00000560005 CYP2W1Q8TAV3 490 aa23.09■■□□□ 1.29
PSEN1-225ENST00000560005 CASP10Q92851 521 aa23.09■■□□□ 1.29
PSEN1-225ENST00000560005 PHKBQ93100 1093 aa23.09■■□□□ 1.29
PSEN1-225ENST00000560005 PPP1R16BQ96T49 567 aa23.09■■□□□ 1.29
PSEN1-225ENST00000560005 CACNA1AO00555 2505 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 GPR182O15218 404 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 PBX3P40426 434 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 SAFBQ15424 915 aaKnown RBP eCLIP23.08■■□□□ 1.29
PSEN1-225ENST00000560005 TPRNQ4KMQ1 711 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 ODR4Q5SWX8 454 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 CES5AQ6NT32 575 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 TMC7Q7Z402 723 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 FRMD5Q7Z6J6 570 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 NECTIN4Q96NY8 510 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 MXRA8Q9BRK3 442 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 HCFC2Q9Y5Z7 792 aa23.08■■□□□ 1.29
PSEN1-225ENST00000560005 NFASCO94856 1347 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms