RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF197O14709 1029 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 GFPT2O94808 682 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 MFN1Q8IWA4 741 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 NIM1KQ8IY84 436 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 UVRAGQ9P2Y5 699 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 E7EWF7 191 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 POLA2Q14181 598 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 LPIN2Q92539 896 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 RAD21L1Q9H4I0 556 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 RSPH1Q8WYR4 309 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 RBM41Q96IZ5 413 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 SPRTNQ9H040 489 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 ITGAXP20702 1163 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 TFAMQ00059 246 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 C16orf89Q6UX73 402 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 VPS50Q96JG6 964 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 TSC22D2O75157 780 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 CCND2P30279 289 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARPP19P56211 112 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 OMA1Q96E52 524 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 ABCC12Q96J65 1359 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 FTCDO95954 541 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 FAM133AQ8N9E0 248 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 MRPL48Q96GC5 212 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF532Q9HCE3 1301 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 MED23Q9ULK4 1368 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 KIAA1024Q9UPX6 916 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 PPARAQ07869 468 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 TRIM16LQ309B1 348 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 DCAF15Q66K64 600 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 PARD6BQ9BYG5 372 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARIH1Q9Y4X5 557 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 CCDC188H7C350 402 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 RPF1Q9H9Y2 349 aaKnown RBP14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 NDFIP2Q9NV92 336 aa14.72□□□□□ -0.05
CSPG4P12-202ENST00000559989 hCG_1642624A0A1W2PR95 340 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 KLC1Q07866 573 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 CSTF3Q12996 717 aaKnown RBP14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 DLGAP5Q15398 846 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARMCX4Q5H9R4 360 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 EYA2O00167 538 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 KCNA2P16389 499 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 APOA5Q6Q788 366 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 RHOT2Q8IXI1 618 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 FOPNLQ96NB1 174 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 DNAJC7Q99615 494 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 OLFM1Q99784 485 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 KRT76Q01546 638 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 ANKRD13CQ8N6S4 541 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 PDCD6IPQ8WUM4 868 aaKnown RBP14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 CCDC134Q9H6E4 229 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 MRGBPQ9NV56 204 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 DCTN4Q9UJW0 460 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 FBXL5Q9UKA1 691 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 MYO1GB0I1T2 1018 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 RNF103O00237 685 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 LRRC74AQ0VAA2 488 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 MEI1Q5TIA1 1274 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 CCNYL1Q8N7R7 359 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF577Q9BSK1 485 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 LRRC53A6NM62 1247 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 AKAP10O43572 662 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 JAK2O60674 1132 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 IL2RBP14784 551 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 MAPRE1Q15691 268 aaKnown RBP14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 CDO1Q16878 200 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 ANO4Q32M45 955 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 KLC4Q9NSK0 619 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 NFU1Q9UMS0 254 aa14.71□□□□□ -0.05
CSPG4P12-202ENST00000559989 PPP2R2AP63151 447 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 PSMD2Q13200 908 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 ATAD3BQ5T9A4 648 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 CNPY4Q8N129 248 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 SLC7A3Q8WY07 619 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 MRPL1Q9BYD6 325 aaKnown RBP14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZC3H7BQ9UGR2 993 aaKnown RBP14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.06
CSPG4P12-202ENST00000559989 MYL1P05976 194 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 NDUFA8P51970 172 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 PRKG1Q13976 671 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 THEMIS2Q5TEJ8 643 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 MAPKAPK5Q8IW41 473 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 CENPTQ96BT3 561 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 MORC2Q9Y6X9 1032 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 PGM1P36871 562 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 MLH1P40692 756 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 ERICH1Q86X53 443 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 KBTBD3Q8NAB2 608 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM162AQ96A26 154 aa14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 CLEC4MQ9H2X3 399 aaPredicted RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 RPRD1BQ9NQG5 326 aaKnown RBP14.7□□□□□ -0.06
CSPG4P12-202ENST00000559989 AASDHQ4L235 1098 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms