RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 INO80BQ9C086 356 aaPredicted RBP11.18□□□□□ -0.62
USP3-216ENST00000559873 POLR3FQ9H1D9 316 aaPredicted RBP11.18□□□□□ -0.62
USP3-216ENST00000559873 TNMDQ9H2S6 317 aa11.18□□□□□ -0.62
USP3-216ENST00000559873 ODF2LQ9ULJ1 636 aa11.18□□□□□ -0.62
USP3-216ENST00000559873 COL4A3BPQ9Y5P4 624 aa11.18□□□□□ -0.62
USP3-216ENST00000559873 PHLPP2Q6ZVD8 1323 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 A0A1B0GVL5 298 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 POLR2DO15514 142 aaKnown RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 SYN1P17600 705 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP3-216ENST00000559873 GUCY2CP25092 1073 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 CYP2C18P33260 490 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 SYKP43405 635 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 PHKA2P46019 1235 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 GPC3P51654 580 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 CCL23P55773 120 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 TMEM62Q0P6H9 643 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 DMP1Q13316 513 aaPredicted RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 DHX8Q14562 1220 aaKnown RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 ZNF618Q5T7W0 954 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 RINT1Q6NUQ1 792 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 CLEC17AQ6ZS10 378 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 WNT8BQ93098 351 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 TMEM143Q96AN5 459 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 ZBTB10Q96DT7 871 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 CELF4Q9BZC1 486 aaKnown RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 WNT8AQ9H1J5 351 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 C17orf75Q9HAS0 396 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 XPNPEP1Q9NQW7 623 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 BLOC1S4Q9NUP1 217 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 SQORQ9Y6N5 450 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 TRIP12Q14669 1992 aaPredicted RBP11.17□□□□□ -0.62
USP3-216ENST00000559873 TCHHQ07283 1943 aa11.17□□□□□ -0.62
USP3-216ENST00000559873 UMODL1Q5DID0 1318 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 A0A087WWV3 80 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 FAM13AO94988 1023 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 VTNP04004 478 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 MYL1P05976 194 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 ACTN1P12814 892 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 CRYBB1P53674 252 aaPredicted RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 NLRP11P59045 1033 aaKnown RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 UBE2HP62256 183 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 MCM6Q14566 821 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 PCBP1Q15365 356 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP3-216ENST00000559873 E2F4Q16254 413 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 NAALADL2Q58DX5 795 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 KANK3Q6NY19 840 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 ZBTB8OSQ8IWT0 167 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 APBB2Q92870 758 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 NLRP4Q96MN2 994 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 PANK2Q9BZ23 570 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
USP3-216ENST00000559873 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
USP3-216ENST00000559873 LTBP2Q14767 1821 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 LRRIQ4A6NIV6 560 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 H0YCG3 227 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
USP3-216ENST00000559873 EFCAB14O75071 495 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 HIP1RO75146 1068 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SLFN14P0C7P3 912 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SCP2P22307 547 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 ABCD1P33897 745 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 ARL2P36404 184 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 NAMPTP43490 491 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 NDUFA8P51970 172 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SMTNP53814 917 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 POU5F1BQ06416 359 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 MGAT3Q09327 533 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 LAMTOR4Q0VGL1 99 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 PAK2Q13177 524 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
USP3-216ENST00000559873 DRP2Q13474 957 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 KIZQ2M2Z5 673 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 MAEAQ7L5Y9 396 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SRGAP1Q7Z6B7 1085 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 RNF149Q8NC42 400 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 DEPTORQ8TB45 409 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 SEPT8Q92599 483 aa11.15□□□□□ -0.62
USP3-216ENST00000559873 BADQ92934 168 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms