RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 RNF169Q8NCN4 708 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 HELQQ8TDG4 1101 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 LRRC2Q9BYS8 371 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 ZBP1Q9H171 429 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 ADAMTS10Q9H324 1103 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 RBM8AQ9Y5S9 174 aaKnown RBP17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 FRYLO94915 3013 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 WDR87Q6ZQQ6 2873 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 SGSM2O43147 1006 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 EOMESO95936 686 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 AOC1P19801 751 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 KRT17Q04695 432 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 ODR4Q5SWX8 454 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 FAM160B1Q5W0V3 765 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 ZNF598Q86UK7 904 aaKnown RBP17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 CCDC105Q8IYK2 499 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 LRRC71Q8N4P6 559 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 SLC22A17Q8WUG5 538 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 DBR1Q9UK59 544 aaKnown RBP17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 COL4A3Q01955 1670 aa17.74■□□□□ 0.43
AC243562.3-201ENST00000559866 IGLV3-22A0A075B6J6 115 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 CXCL14O95715 111 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 CALM1P0DP23 149 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 CALM2P0DP24 149 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 CALM3P0DP25 149 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 SREBF1P36956 1147 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 BCAR1P56945 870 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 NLRP11P59045 1033 aaKnown RBP17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 ANGPT1Q15389 498 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 TMC5Q6UXY8 1006 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 ABI1Q8IZP0 508 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 METTL13Q8N6R0 699 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 MAP4K1Q92918 833 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 RMDN1Q96DB5 314 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 VN1R3Q9BXE9 311 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 RIC8AQ9NPQ8 531 aa17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 RIF1Q5UIP0 2472 aaKnown RBP17.73■□□□□ 0.43
AC243562.3-201ENST00000559866 HOXA2O43364 376 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 NARSO43776 548 aaKnown RBP17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 B4GALT3O60512 393 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 MCM5P33992 734 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 MICU3Q86XE3 530 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 FANCMQ8IYD8 2048 aa17.72■□□□□ 0.43
AC243562.3-201ENST00000559866 CSDE1O75534 798 aaKnown RBP17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 NAPAP54920 295 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 MIS18BP1Q6P0N0 1132 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 DTWD2Q8NBA8 298 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 CYP26B1Q9NR63 512 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 DZANK1Q9NVP4 752 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 AKT3Q9Y243 479 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 USTQ9Y2C2 406 aa17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 PTPRZ1P23471 2315 aaPredicted RBP17.71■□□□□ 0.43
AC243562.3-201ENST00000559866 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 N4BP1O75113 896 aaKnown RBP17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 GPC3P51654 580 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 ADCY7P51828 1080 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 FUT2Q10981 343 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 LONRF3Q496Y0 759 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 ATAT1Q5SQI0 421 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 EFCAB12Q6NXP0 572 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 SIX5Q8N196 739 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 LPPQ93052 612 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
AC243562.3-201ENST00000559866 A0A0U1RQF3 1178 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 IPO5O00410 1097 aaKnown RBP17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 ZNF862O60290 1169 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 ZC3H11AO75152 810 aaKnown RBP eCLIP17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 CTSAP10619 480 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 LIFRP42702 1097 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 DRP2Q13474 957 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 PLCD3Q8N3E9 789 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 KCNK12Q9HB15 430 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 GABBR1Q9UBS5 961 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 IRAK3Q9Y616 596 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 SLC12A7Q9Y666 1083 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 R4GN57 208 aa17.69■□□□□ 0.42
AC243562.3-201ENST00000559866 KRBA1A5PL33 1030 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms