RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MIER3Q7Z3K6 550 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 PIGOQ8TEQ8 1089 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 GPRASP2Q96D09 838 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 AGO4Q9HCK5 861 aaKnown RBP19.56■□□□□ 0.72
SNX1-208ENST00000559844 PDGFCQ9NRA1 345 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 TBC1D22BQ9NU19 505 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 SEL1LQ9UBV2 794 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 FAM184BQ9ULE4 1060 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 SIK3Q9Y2K2 1263 aa19.56■□□□□ 0.72
SNX1-208ENST00000559844 PDXKO00764 312 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 EDEM3Q9BZQ6 932 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 ODF2LQ9ULJ1 636 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 EIF3DO15371 548 aaKnown RBP eCLIP19.55■□□□□ 0.72
SNX1-208ENST00000559844 PRKAR2AP13861 404 aaKnown RBP19.55■□□□□ 0.72
SNX1-208ENST00000559844 CACNB2Q08289 660 aaPredicted RBP19.55■□□□□ 0.72
SNX1-208ENST00000559844 ADAM9Q13443 819 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 TAPT1Q6NXT6 567 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 MAP7D2Q96T17 732 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 LXNQ9BS40 222 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 PRDM10Q9NQV6 1147 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 PKD2L1Q9P0L9 805 aa19.55■□□□□ 0.72
SNX1-208ENST00000559844 EPN1Q9Y6I3 576 aaPredicted RBP19.55■□□□□ 0.72
SNX1-208ENST00000559844 LOXHD1Q8IVV2 1947 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 KIF5CO60282 957 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 P4HBP07237 508 aaKnown RBP19.54■□□□□ 0.72
SNX1-208ENST00000559844 ZNF865P0CJ78 1059 aaPredicted RBP19.54■□□□□ 0.72
SNX1-208ENST00000559844 KLK7P49862 253 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 CDK17Q00537 523 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 STXBP4Q6ZWJ1 553 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 SH3TC2Q8TF17 1288 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 SCFD2Q8WU76 684 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 CDHR1Q96JP9 859 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 AGPAT5Q9NUQ2 364 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 TYW1Q9NV66 732 aaKnown RBP19.54■□□□□ 0.72
SNX1-208ENST00000559844 UBE4BO95155 1302 aa19.54■□□□□ 0.72
SNX1-208ENST00000559844 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 NDUFA10O95299 355 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 INHAP05111 366 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 CYBAP13498 195 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 ICAM3P32942 547 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 CYLC1P35663 651 aaPredicted RBP19.53■□□□□ 0.72
SNX1-208ENST00000559844 ADCYAP1R1P41586 468 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 CASP5P51878 434 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 SLC9C1Q4G0N8 1177 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 ARHGAP29Q52LW3 1261 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 TRIM59Q8IWR1 403 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 CCDC170Q8IYT3 715 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 TRPV1Q8NER1 839 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 CHP1Q99653 195 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 ZSWIM4Q9H7M6 989 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 PARVGQ9HBI0 331 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNX1-208ENST00000559844 ARHGEF35A5YM69 484 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 RSPH10B2B2RC85 870 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 NKRFO15226 690 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNX1-208ENST00000559844 MAFGO15525 162 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 DHX15O43143 795 aaKnown RBP19.53■□□□□ 0.72
SNX1-208ENST00000559844 GCNT3O95395 438 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 RSPH10BP0C881 870 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 MYBP10242 640 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 GUCY2CP25092 1073 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 RPL13P26373 211 aaKnown RBP19.53■□□□□ 0.72
SNX1-208ENST00000559844 KRT83P78385 493 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 PPP2R3AQ06190 1150 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 TTLL4Q14679 1199 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 FBXO46Q6PJ61 603 aaPredicted RBP19.53■□□□□ 0.72
SNX1-208ENST00000559844 WDR59Q6PJI9 974 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 ACRBPQ8NEB7 543 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 TSC1Q92574 1164 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 LZTFL1Q9NQ48 299 aa19.53■□□□□ 0.72
SNX1-208ENST00000559844 DDX39AO00148 427 aaKnown RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 PRPF6O94906 941 aaKnown RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 ARIH2O95376 493 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 NR2F2P24468 414 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 PKN2Q16513 984 aaKnown RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 KCNV1Q6PIU1 500 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 FRMD5Q7Z6J6 570 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 MYCT1Q8N699 235 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 NEK11Q8NG66 645 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 MMRN2Q9H8L6 949 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 MYO1AQ9UBC5 1043 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 TCEAL9Q9UHQ7 104 aa19.52■□□□□ 0.72
SNX1-208ENST00000559844 ZNF215Q9UL58 517 aaPredicted RBP19.52■□□□□ 0.72
SNX1-208ENST00000559844 RBM47A0AV96 593 aaKnown RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 ATP9AO75110 1047 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 URI1O94763 535 aaPredicted RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 TGFB3P10600 412 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 CNGA1P29973 690 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 HNRNPH3P31942 346 aaKnown RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 ZNF131P52739 623 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 ITGB3BPQ13352 177 aaPredicted RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 LY6KQ17RY6 165 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 MAP3K21Q5TCX8 1036 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 BANK1Q8NDB2 785 aa19.52■□□□□ 0.71
SNX1-208ENST00000559844 WRAP73Q9P2S5 460 aaPredicted RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 DBR1Q9UK59 544 aaKnown RBP19.52■□□□□ 0.71
SNX1-208ENST00000559844 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.51■□□□□ 0.71
SNX1-208ENST00000559844 LYPLA2O95372 231 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms