RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 TCP11Q8WWU5 503 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 KIFAP3Q92845 792 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 JPH2Q9BR39 696 aaPredicted RBP11.54□□□□□ -0.56
TPM1-221ENST00000559831 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
TPM1-221ENST00000559831 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 DNAJC25Q9H1X3 360 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 MRPL44Q9H9J2 332 aaKnown RBP11.54□□□□□ -0.56
TPM1-221ENST00000559831 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 HDAC6Q9UBN7 1215 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 MAPK8IP1Q9UQF2 711 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 NRCAMQ92823 1304 aa11.54□□□□□ -0.56
TPM1-221ENST00000559831 IGKV6-21A0A0C4DH24 114 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 A0A1W2PQ45 241 aaPredicted RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 A0A1W2PQY0 241 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 CCDC169A6NNP5 214 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 K7ENM7 598 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 CABYRO75952 493 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 TFRCP02786 760 aaKnown RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 PLS3P13797 630 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 BMP6P22004 513 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 DNM2P50570 870 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 ZNF131P52739 623 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 PEX3P56589 373 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 ZNF200P98182 395 aaPredicted RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 EHHADHQ08426 723 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 STK4Q13043 487 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 PSMD2Q13200 908 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 DMP1Q13316 513 aaPredicted RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 DRP2Q13474 957 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 IER5Q5VY09 327 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 NFRKBQ6P4R8 1299 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 C11orf57Q6ZUT1 292 aaPredicted RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 FAM178BQ8IXR5 827 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 KIAA0895Q8NCT3 520 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 IFT74Q96LB3 600 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 GLT1D1Q96MS3 346 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
TPM1-221ENST00000559831 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 AKT3Q9Y243 479 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 SIP14410 1827 aa11.53□□□□□ -0.56
TPM1-221ENST00000559831 DNM1LO00429 736 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 SLC16A4O15374 487 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 TREHO43280 583 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GAS2O43903 313 aaKnown RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 GCNT3O95395 438 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 SGPL1O95470 568 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GJB1P08034 283 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 MYBP10242 640 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GNAT1P11488 350 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 CYP2C9P11712 490 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 GLRA2P23416 452 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 TMOD1P28289 359 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 ARL2P36404 184 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 STIM1Q13586 685 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 ITGA7Q13683 1181 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 HIC1Q14526 733 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 RUFY4Q6ZNE9 571 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 RHPN2Q8IUC4 686 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 PSPC1Q8WXF1 523 aaKnown RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 PPP1R16BQ96T49 567 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 KIFC3Q9BVG8 833 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 FGFBP2Q9BYJ0 223 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GTPBP4Q9BZE4 634 aaKnown RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
TPM1-221ENST00000559831 KMT5AQ9NQR1 393 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 STARD7Q9NQZ5 370 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 GTF2IRD1Q9UHL9 959 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 CTNND2Q9UQB3 1225 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
TPM1-221ENST00000559831 A0A0U1RQG5 324 aaPredicted RBP11.51□□□□□ -0.57
TPM1-221ENST00000559831 LRRIQ4A6NIV6 560 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
TPM1-221ENST00000559831 PRCPP42785 496 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 NPTX2P47972 431 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 CASP5P51878 434 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 SMTNP53814 917 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 RTP1P59025 263 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 PPP2R5AQ15172 486 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
TPM1-221ENST00000559831 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms