RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 FANCCQ00597 558 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 DGKDQ16760 1214 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 BMT2Q1RMZ1 405 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 LRRC55Q6ZSA7 311 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 CSGALNACT2Q8N6G5 542 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 PDLIM2Q96JY6 352 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 NAP1L5Q96NT1 182 aaPredicted RBP19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 SRRTQ9BXP5 876 aaKnown RBP19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 TUT1Q9H6E5 874 aaKnown RBP19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 SIP14410 1827 aa19.12■□□□□ 0.65
CHRNA3-206ENST00000559658 TISP43B9A030 160 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 PGK1P00558 417 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 INSRRP14616 1297 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 MCPH1Q8NEM0 835 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 ZNF507Q8TCN5 953 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 XPO4Q9C0E2 1151 aaKnown RBP19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 LARSQ9P2J5 1176 aaKnown RBP19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 SEL1LQ9UBV2 794 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 TGFB1I1O43294 461 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 MAFO75444 373 aaPredicted RBP19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 GLRA2P23416 452 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 TBC1D8BQ0IIM8 1120 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 TPD52L1Q16890 204 aaPredicted RBP19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 SLC7A3Q8WY07 619 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 TIPINQ9BVW5 301 aa19.11■□□□□ 0.65
CHRNA3-206ENST00000559658 CCDC169A6NNP5 214 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 C22orf31O95567 290 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 SLC26A2P50443 739 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 NCKAP1LP55160 1127 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 C1QTNF8P60827 252 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 KNOP1Q1ED39 458 aaKnown RBP19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 RAET1EQ8TD07 263 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 KIFAP3Q92845 792 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 ERO1AQ96HE7 468 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 ZNF668Q96K58 619 aaPredicted RBP19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 SUGCTQ9HAC7 445 aa19.1■□□□□ 0.65
CHRNA3-206ENST00000559658 BICDL2A1A5D9 508 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 HBP1O60381 514 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 F2P00734 622 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 ARL2P36404 184 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 RFC5P40937 340 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 CLCN3P51790 818 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 TPM4P67936 248 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 HIC1Q14526 733 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 FSCN1Q16658 493 aaKnown RBP19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 HAUS6Q7Z4H7 955 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 USP20Q9Y2K6 914 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 FRMPD3Q5JV73 1810 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 IGKV6-21A0A0C4DH24 114 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 EIF3DO15371 548 aaKnown RBP eCLIP19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 SEPT4O43236 478 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 HMGCRP04035 888 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 MYL3P08590 195 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 C6orf222P0C671 652 aaPredicted RBP19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 PPP1R2P41236 205 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 DMP1Q13316 513 aaPredicted RBP19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 KRT31Q15323 416 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 TAS1R3Q7RTX0 852 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 NRBP1Q9UHY1 535 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 PTCH2Q9Y6C5 1203 aa19.09■□□□□ 0.65
CHRNA3-206ENST00000559658 CLIC2O15247 247 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 DUSP11O75319 330 aaKnown RBP19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 SERPINC1P01008 464 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 LRRC63Q05C16 580 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 CAPSQ13938 189 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 TCP11X2Q5H9J9 407 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 MARCH8Q5T0T0 291 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 MAP3K21Q5TCX8 1036 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 SPC24Q8NBT2 197 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 PPP1R9BQ96SB3 815 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 AP5M1Q9H0R1 490 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 TAB2Q9NYJ8 693 aa19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 ZNF215Q9UL58 517 aaPredicted RBP19.08■□□□□ 0.65
CHRNA3-206ENST00000559658 TRIP12Q14669 1992 aaPredicted RBP19.08■□□□□ 0.64
CHRNA3-206ENST00000559658 EDN1P05305 212 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 KIAA0753Q2KHM9 967 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 CNOT6LQ96LI5 555 aaKnown RBP19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 THAP9Q9H5L6 903 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 KMT5AQ9NQR1 393 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 DENND3A2RUS2 1198 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 INHAP05111 366 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 MAPTP10636 758 aaKnown RBP19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 HOXD10P28358 340 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 CPT1AP50416 773 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 GTF2BQ00403 316 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 CCDC173Q0VFZ6 552 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 PPFIA1Q13136 1202 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 GRIK4Q16099 956 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 PRPF31Q8WWY3 499 aaKnown RBP19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 TYW1Q9NV66 732 aaKnown RBP19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 SETD4Q9NVD3 440 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms