RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MTMR9Q96QG7 549 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 NACC1Q96RE7 527 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 PPP1R16BQ96T49 567 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 MTRQ99707 1265 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 ADAM2Q99965 735 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SH2D3AQ9BRG2 576 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 AGO3Q9H9G7 860 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 ATP6V0A4Q9HBG4 840 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 TUFT1Q9NNX1 390 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 CHST12Q9NRB3 414 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 ANKEF1Q9NU02 776 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 RGL1Q9NZL6 768 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SUCLA2Q9P2R7 463 aaPredicted RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 ST3GAL5Q9UNP4 418 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 PCDHB7Q9Y5E2 793 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 A0A087WZ62 844 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 IGKV6-21A0A0C4DH24 114 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 TMEM150BA6NC51 233 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 K7ELQ4 463 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 HOXA2O43364 376 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 DGKIO75912 1065 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ERLIN2O94905 339 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 BMP15O95972 392 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 SRGAP2CP0DJJ0 459 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 SKIP12755 728 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 IBSPP21815 317 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 RPA1P27694 616 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 PRPHP41219 470 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 SARSP49591 514 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 NPEPPSP55786 919 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ERVK-21P61565 698 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 HTRA4P83105 476 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 TAP1Q03518 808 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 PTGDRQ13258 359 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 BTG3Q14201 252 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 EMC2Q15006 297 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 SKIV2LQ15477 1246 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 PTPROQ16827 1216 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 TCTN1Q2MV58 587 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ARL6IP4Q66PJ3 421 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 PLA2G4FQ68DD2 849 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 TWF2Q6IBS0 349 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 BRAPQ7Z569 592 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 SRGAP1Q7Z6B7 1085 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 CATSPER3Q86XQ3 398 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 HSCBQ8IWL3 235 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 FIBCD1Q8N539 461 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 KCTD17Q8N5Z5 321 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 LINC01465Q8N7H1 131 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 RNF149Q8NC42 400 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 MCPH1Q8NEM0 835 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 TMEM40Q8WWA1 233 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 PRPF31Q8WWY3 499 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 PPM1EQ8WY54 764 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 RSPH1Q8WYR4 309 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 TMEM143Q96AN5 459 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 FDXACB1Q9BRP7 624 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 TMEM60Q9H2L4 133 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ADAMTS10Q9H324 1103 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 DHX33Q9H6R0 707 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 ELAC1Q9H777 363 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 CERS4Q9HA82 394 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 CDHR5Q9HBB8 845 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ERVK-5Q9HDB9 667 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 AAASQ9NRG9 546 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 RGS18Q9NS28 235 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 LRWD1Q9UFC0 647 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 MTUS1Q9ULD2 1270 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 DNM3Q9UQ16 869 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 NOC2LQ9Y3T9 749 aaKnown RBP4.87□□□□□ -1.63
SNX1-205ENST00000559339 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 COL4A3BPQ9Y5P4 624 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 ADGRA3Q8IWK6 1321 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 COL6A3P12111 3177 aa4.87□□□□□ -1.63
SNX1-205ENST00000559339 TRIP12Q14669 1992 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 KAT6AQ92794 2004 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 LCHNA4D1U4 455 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 VPS37CA5D8V6 355 aaPredicted RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 ARHGEF35A5YM69 484 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CARNS1A5YM72 827 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 INO80B-WBP1J3KQ70 363 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 HAX1O00165 279 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 WNT7AO00755 349 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 RIOK3O14730 519 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 USO1O60763 962 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 STBD1O95210 358 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 EOMESO95936 686 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 RB1P06400 928 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CTNNB1P35222 781 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 BMPR1AP36894 532 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 CCT6AP40227 531 aaKnown RBP4.86□□□□□ -1.63
SNX1-205ENST00000559339 PHKA2P46019 1235 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 RARRES1P49788 294 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 RAB27AP51159 221 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 POU5F1BQ06416 359 aa4.86□□□□□ -1.63
SNX1-205ENST00000559339 LAMTOR4Q0VGL1 99 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms