RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 RSAD2Q8WXG1 361 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 MTMR8Q96EF0 704 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 FERMT1Q9BQL6 677 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 ADAM33Q9BZ11 813 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SCOCQ9UIL1 159 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SYNGAP1Q96PV0 1343 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 FAM237AA0A1B0GTK4 181 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 RASA4BC9J798 803 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 RASA4O43374 803 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 TOM1O60784 492 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 RAD23BP54727 409 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 SKOR1P84550 965 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 KNOP1Q1ED39 458 aaKnown RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 TMED8Q6PL24 325 aaPredicted RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 PALMDQ9NP74 551 aa7.65□□□□□ -1.19
USP3-210ENST00000559192 CHORDC1Q9UHD1 332 aaPredicted RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 CCNL1Q9UK58 526 aaPredicted RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 REXO2Q9Y3B8 237 aaKnown RBP7.65□□□□□ -1.19
USP3-210ENST00000559192 MON2Q7Z3U7 1717 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 CCT8L1PA6NM43 557 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 MFAP3P55082 362 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 ANKRD20A8PQ5CZ79 823 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 EPM2AIP1Q7L775 607 aaPredicted RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 ZC3H18Q86VM9 953 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 LRRC34Q8IZ02 419 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 FAM84BQ96KN1 310 aaPredicted RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 ANO3Q9BYT9 981 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 XRN1Q8IZH2 1706 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 MEGF6O75095 1541 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 CFAP73A6NFT4 308 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 USP17L10C9JJH3 530 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 SMIM22K7EJ46 135 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 IGF2BP3O00425 579 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP3-210ENST00000559192 PODXLO00592 558 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TRIM49P0CI25 452 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TRIM49CP0CI26 452 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 BRAFP15056 766 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 PHBP35232 272 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 DYNLT1P63172 113 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 AMPD2Q01433 879 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TROAPQ12815 778 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 DOK7Q18PE1 504 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP3-210ENST00000559192 KLHDC7AQ5VTJ3 777 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TTBK2Q6IQ55 1244 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 RFX8Q6ZV50 586 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TRPM8Q7Z2W7 1104 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 METTL13Q8N6R0 699 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 NSUN4Q96CB9 384 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 INTS2Q9H0H0 1204 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 DIS3Q9Y2L1 958 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 A0A087X0T9 212 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 A0A0G2JND7 137 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 WNT7AO00755 349 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 MAPK13O15264 365 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 FAM228BP0C875 321 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 GAP43P17677 238 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 BFSP1Q12934 665 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 TRAF1Q13077 416 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 KIAA1755Q5JYT7 1200 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 WDR59Q6PJI9 974 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 ATP2A3Q93084 1043 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 SEPT10Q9P0V9 454 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 MAD2L2Q9UI95 211 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 AGLP35573 1532 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 UCHL3P15374 230 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 ZFXP17010 805 aaPredicted RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 HSPA9P38646 679 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 NSFP46459 744 aaKnown RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 RWDD2BP57060 319 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 SPATA21Q7Z572 469 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 ZNF713Q8N859 430 aaPredicted RBP7.64□□□□□ -1.19
USP3-210ENST00000559192 ANKS1AQ92625 1134 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 SAYSD1Q9NPB0 183 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 NWD1Q149M9 1564 aa7.64□□□□□ -1.19
USP3-210ENST00000559192 PABPN1LA6NDY0 278 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 CAND2O75155 1236 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 CA4P22748 312 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ERFP50548 548 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GALCP54803 685 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ITIH3Q06033 890 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 PLCB4Q15147 1175 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SEC23AQ15436 765 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SMIM5Q71RC9 77 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 CPXCR1Q8N123 301 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 EPS8L3Q8TE67 593 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 NUP85Q9BW27 656 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 PARVGQ9HBI0 331 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SRP68Q9UHB9 627 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 GOLGA8SH3BPF8 625 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GOLGA8MH3BSY2 632 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GDF11O95390 407 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 FTLP02792 175 aaPredicted RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 MYBP10242 640 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 HSPA6P17066 643 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SOX5P35711 763 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ICA1Q05084 483 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms