RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 OSMRQ99650 979 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 GDF15Q99988 308 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 POLR3FQ9H1D9 316 aaPredicted RBP12.13□□□□□ -0.47
TPM1-217ENST00000559108 MINDY3Q9H8M7 445 aa12.13□□□□□ -0.47
TPM1-217ENST00000559108 ADGRA3Q8IWK6 1321 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 MYMKA6NI61 221 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
TPM1-217ENST00000559108 DGAT1O75907 488 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM1-217ENST00000559108 GHRP10912 638 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 FGFR4P22455 802 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 NDUFA8P51970 172 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 NLRP11P59045 1033 aaKnown RBP12.12□□□□□ -0.47
TPM1-217ENST00000559108 CAPSQ13938 189 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 C9orf50Q5SZB4 431 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 DEFB128Q7Z7B8 93 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 TMEM87AQ8NBN3 555 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 PRPF31Q8WWY3 499 aaKnown RBP12.12□□□□□ -0.47
TPM1-217ENST00000559108 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 DHX58Q96C10 678 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 CALML4Q96GE6 196 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
TPM1-217ENST00000559108 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
TPM1-217ENST00000559108 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
TPM1-217ENST00000559108 A0A087WZ62 844 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 POLR2DO15514 142 aaKnown RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 SLC26A4O43511 780 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 HIP1RO75146 1068 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 CXCL10P02778 98 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 LIG1P18858 919 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 CMA1P23946 247 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 BFSP2Q13515 415 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 RRAGBQ5VZM2 374 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 GPBP1Q86WP2 473 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 SLC7A3Q8WY07 619 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 CDK5RAP3Q96JB5 506 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPM1-217ENST00000559108 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 CELF4Q9BZC1 486 aaKnown RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 NT5C3AQ9H0P0 336 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 AKT3Q9Y243 479 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 USP20Q9Y2K6 914 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
TPM1-217ENST00000559108 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
TPM1-217ENST00000559108 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 CAND2O75155 1236 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 CD52P31358 61 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 STAT6P42226 847 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 FPGSQ05932 587 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
TPM1-217ENST00000559108 GIT2Q14161 759 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 FAM102BQ5T8I3 360 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 IER5Q5VY09 327 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 DNAJC19Q96DA6 116 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 NLRP4Q96MN2 994 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 FGFBP2Q9BYJ0 223 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
TPM1-217ENST00000559108 STK17AQ9UEE5 414 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
TPM1-217ENST00000559108 MGEA5O60502 916 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 SRGAP2CP0DJJ0 459 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
TPM1-217ENST00000559108 GUCY2CP25092 1073 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 CCDC73Q6ZRK6 1079 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 TAS1R3Q7RTX0 852 aa12.09□□□□□ -0.47
TPM1-217ENST00000559108 TMCO2Q7Z6W1 182 aaPredicted RBP12.09□□□□□ -0.47
TPM1-217ENST00000559108 RTN4RL1Q86UN2 441 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms