RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 HLA-CQ95604 372 aa19.72■□□□□ 0.75
SMAD3-210ENST00000559092 MTMR9Q96QG7 549 aa19.72■□□□□ 0.75
SMAD3-210ENST00000559092 SUCLA2Q9P2R7 463 aaPredicted RBP19.72■□□□□ 0.75
SMAD3-210ENST00000559092 PRRC2BQ5JSZ5 2229 aaKnown RBP19.71■□□□□ 0.75
SMAD3-210ENST00000559092 ST18O60284 1047 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
SMAD3-210ENST00000559092 FOSBP53539 338 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 NCAPH2Q6IBW4 605 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 ZNF410Q86VK4 478 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 SLC7A3Q8WY07 619 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 CEP170P1Q96L14 293 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 SCLT1Q96NL6 688 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 HSD17B14Q9BPX1 270 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 LXNQ9BS40 222 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 GCOM2Q9BZD3 368 aaPredicted RBP19.71■□□□□ 0.75
SMAD3-210ENST00000559092 INO80BQ9C086 356 aaPredicted RBP19.71■□□□□ 0.75
SMAD3-210ENST00000559092 TTC12Q9H892 705 aaPredicted RBP19.71■□□□□ 0.75
SMAD3-210ENST00000559092 TMEM161AQ9NX61 479 aa19.71■□□□□ 0.75
SMAD3-210ENST00000559092 TTC3P53804 2025 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 GAS2O43903 313 aaKnown RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 SLITRK3O94933 977 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 LYPLA2O95372 231 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 YWHABP31946 246 aaKnown RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 RFC5P40937 340 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 GUCY1B3Q02153 619 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 ORC2Q13416 577 aaPredicted RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 DRP2Q13474 957 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 TIGD5Q53EQ6 642 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 NEK9Q8TD19 979 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 P2RX5Q93086 422 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 LMAN2LQ9H0V9 348 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 DHX33Q9H6R0 707 aaKnown RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 ATP6V0A4Q9HBG4 840 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 RGL1Q9NZL6 768 aa19.7■□□□□ 0.74
SMAD3-210ENST00000559092 WRAP73Q9P2S5 460 aaPredicted RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 MRPL42Q9Y6G3 142 aaKnown RBP19.7■□□□□ 0.74
SMAD3-210ENST00000559092 NPEPPSP55786 919 aa19.69■□□□□ 0.74
SMAD3-210ENST00000559092 PLA2G4FQ68DD2 849 aa19.69■□□□□ 0.74
SMAD3-210ENST00000559092 DYDC2Q96IM9 177 aa19.69■□□□□ 0.74
SMAD3-210ENST00000559092 EIF2AK1Q9BQI3 630 aaKnown RBP19.69■□□□□ 0.74
SMAD3-210ENST00000559092 CHST12Q9NRB3 414 aa19.69■□□□□ 0.74
SMAD3-210ENST00000559092 TTC28Q96AY4 2481 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 SIP14410 1827 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 HOXA2O43364 376 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 TXKP42681 527 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 TRAPPC10P48553 1259 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 POLGP54098 1239 aaPredicted RBP19.68■□□□□ 0.74
SMAD3-210ENST00000559092 RHPN2Q8IUC4 686 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 TPH2Q8IWU9 490 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 DACT1Q9NYF0 836 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 KIF3AQ9Y496 699 aa19.68■□□□□ 0.74
SMAD3-210ENST00000559092 REV3LO60673 3130 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 MYH9P35579 1960 aaKnown RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 A0A087WZ62 844 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 WNT7AO00755 349 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 ASAP2O43150 1006 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 XRCC6P12956 609 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 BMP1P13497 986 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 SFPQP23246 707 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■□□ 17.4
SMAD3-210ENST00000559092 TFF2Q03403 129 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 CTTNQ14247 550 aaKnown RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 PAN2Q504Q3 1202 aaKnown RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 NOSTRINQ8IVI9 506 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 ZNF579Q8NAF0 562 aaKnown RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 TCP11Q8WWU5 503 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 PSPC1Q8WXF1 523 aaKnown RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 ZNF668Q96K58 619 aaPredicted RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 FDXACB1Q9BRP7 624 aaPredicted RBP19.67■□□□□ 0.74
SMAD3-210ENST00000559092 TRAIPQ9BWF2 469 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 ANKEF1Q9NU02 776 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 PLAGL2Q9UPG8 496 aa19.67■□□□□ 0.74
SMAD3-210ENST00000559092 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.66■□□□□ 0.74
SMAD3-210ENST00000559092 A0A0U1RQF3 1178 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 GRM6O15303 877 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 NCK2O43639 380 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 EOMESO95936 686 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 MCM7P33993 719 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 MCM2P49736 904 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 CYP4A11Q02928 519 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 GNL2Q13823 731 aaKnown RBP19.66■□□□□ 0.74
SMAD3-210ENST00000559092 XKR9Q5GH70 373 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 FAM102BQ5T8I3 360 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 PRPF31Q8WWY3 499 aaKnown RBP19.66■□□□□ 0.74
SMAD3-210ENST00000559092 TMEM60Q9H2L4 133 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 NSUN3Q9H649 340 aaKnown RBP19.66■□□□□ 0.74
SMAD3-210ENST00000559092 AAASQ9NRG9 546 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 COL4A3BPQ9Y5P4 624 aa19.66■□□□□ 0.74
SMAD3-210ENST00000559092 TBKBP1A7MCY6 615 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 ATP2B1P20020 1258 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 U2AF2P26368 475 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMAD3-210ENST00000559092 GATMP50440 423 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 CSPP1Q1MSJ5 1256 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 ECHDC2Q86YB7 292 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 RSPH1Q8WYR4 309 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 TMEM117Q9H0C3 514 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 IFT122Q9HBG6 1241 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 PCDHB12Q9Y5F1 795 aa19.65■□□□□ 0.74
SMAD3-210ENST00000559092 ZBTB39O15060 712 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms