RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PGK2P07205 417 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 ZFYP08048 801 aaPredicted RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 LIG1P18858 919 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 TMEM132BQ14DG7 1078 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 LRRFIP1Q32MZ4 808 aaKnown RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 FAM47AQ5JRC9 791 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 PRAMEF19Q5SWL8 479 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 CPXCR1Q8N123 301 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 MB21D1Q8N884 522 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 TRPV1Q8NER1 839 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 MMP19Q99542 508 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 SENP6Q9GZR1 1112 aaPredicted RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 NAPBQ9H115 298 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 CLIP2Q9UDT6 1046 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 DDX20Q9UHI6 824 aaKnown RBP8.71□□□□□ -1.02
SPG11-213ENST00000558988 PFASO15067 1338 aa8.71□□□□□ -1.02
SPG11-213ENST00000558988 COL11A1P12107 1806 aaPredicted RBP8.7□□□□□ -1.02
SPG11-213ENST00000558988 TNFRSF21O75509 655 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 NDUFB10O96000 172 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 ADRB1P08588 477 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 FCER1AP12319 257 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 GNAT2P19087 354 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 RFX1P22670 979 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 MAGEA10P43363 369 aaPredicted RBP8.7□□□□□ -1.02
SPG11-213ENST00000558988 IKQ13123 557 aaPredicted RBP8.7□□□□□ -1.02
SPG11-213ENST00000558988 TTLL4Q14679 1199 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 KCTD2Q14681 263 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 LRRC26Q2I0M4 334 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
SPG11-213ENST00000558988 IFNL3Q8IZI9 196 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 MROH8Q9H579 483 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 SLC5A4Q9NY91 659 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 PCOLCE2Q9UKZ9 415 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 A0A0G2JMZ2 1700 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 TTC41PQ6P2S7 1318 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 CENPFP49454 3210 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 RLFQ13129 1914 aa8.7□□□□□ -1.02
SPG11-213ENST00000558988 FRMPD3Q5JV73 1810 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 F5H6K3 240 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 VWA5AO00534 786 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 STRNO43815 780 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 SLC3A2P08195 630 aaKnown RBP8.69□□□□□ -1.02
SPG11-213ENST00000558988 HOXC6P09630 235 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 TSPY3P0CV98 308 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 TSPY8P0CW00 308 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 CYBAP13498 195 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 STAT3P40763 770 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 GRIA4P48058 902 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 KLRC3Q07444 240 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 SBK1Q52WX2 424 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 SNRNP48Q6IEG0 339 aaKnown RBP8.69□□□□□ -1.02
SPG11-213ENST00000558988 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 GIMAP6Q6P9H5 292 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 SHCBP1Q8NEM2 672 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 FERMT2Q96AC1 680 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 CEP95Q96GE4 821 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 BORCS6Q96GS4 357 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 SLF1Q9BQI6 1058 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 HOMER2Q9NSB8 354 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 ATP11BQ9Y2G3 1177 aa8.69□□□□□ -1.02
SPG11-213ENST00000558988 PARP14Q460N5 1801 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 MYH4Q9Y623 1939 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
SPG11-213ENST00000558988 KBTBD13C9JR72 458 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 MSCO60682 206 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 SLC25A27O95847 323 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 CAPN2P17655 700 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 TFAP4Q01664 338 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 ID3Q02535 119 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 PDE4BQ07343 736 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 PPARAQ07869 468 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 RRP12Q5JTH9 1297 aaKnown RBP8.68□□□□□ -1.02
SPG11-213ENST00000558988 RILPL2Q969X0 211 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 DDX11Q96FC9 970 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 ZNF287Q9HBT7 754 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 RAVER2Q9HCJ3 691 aaKnown RBP8.68□□□□□ -1.02
SPG11-213ENST00000558988 INCENPQ9NQS7 918 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 PRDM5Q9NQX1 630 aaPredicted RBP8.68□□□□□ -1.02
SPG11-213ENST00000558988 NYAP2Q9P242 653 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 FOXD3Q9UJU5 478 aaPredicted RBP8.68□□□□□ -1.02
SPG11-213ENST00000558988 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
SPG11-213ENST00000558988 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 NMT2O60551 498 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 ZBED4O75132 1171 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 TTLL1O95922 423 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 B3GALT4O96024 378 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 RTP1P59025 263 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 SNAP25P60880 206 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 OLFML2BQ68BL8 750 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 SLFN13Q68D06 897 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 RIOX2Q8IUF8 465 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 ARRDC4Q8NCT1 418 aa8.67□□□□□ -1.02
SPG11-213ENST00000558988 LBHD1Q9BQE6 289 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms