RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 OLFML3Q9NRN5 406 aa20■□□□□ 0.79
CLPX-203ENST00000558958 LARSQ9P2J5 1176 aaKnown RBP20■□□□□ 0.79
CLPX-203ENST00000558958 OGDHLQ9ULD0 1010 aa20■□□□□ 0.79
CLPX-203ENST00000558958 GDAQ9Y2T3 454 aa20■□□□□ 0.79
CLPX-203ENST00000558958 ADAM17P78536 824 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 MKRN4PQ13434 485 aaPredicted RBP19.99■□□□□ 0.79
CLPX-203ENST00000558958 ODR4Q5SWX8 454 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 IER5Q5VY09 327 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 SMYD4Q8IYR2 804 aaPredicted RBP19.99■□□□□ 0.79
CLPX-203ENST00000558958 C7orf31Q8N865 590 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 RETREG2Q8NC44 543 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 KIAA0895Q8NCT3 520 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 TCP11Q8WWU5 503 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 ZBTB10Q96DT7 871 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 FIZ1Q96SL8 496 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 SUGCTQ9HAC7 445 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 TBC1D7Q9P0N9 293 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 HDAC6Q9UBN7 1215 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 BRCA2P51587 3418 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 MBLAC1A4D2B0 266 aaPredicted RBP19.99■□□□□ 0.79
CLPX-203ENST00000558958 KBTBD13C9JR72 458 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 DRP2Q13474 957 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 HIC1Q14526 733 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 EFCAB12Q6NXP0 572 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 C11orf57Q6ZUT1 292 aaPredicted RBP19.99■□□□□ 0.79
CLPX-203ENST00000558958 LRRC71Q8N4P6 559 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 LINC01465Q8N7H1 131 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 BSNDQ8WZ55 320 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 FGFBP2Q9BYJ0 223 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 DNAJC25Q9H1X3 360 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 PHF24Q9UPV7 400 aa19.99■□□□□ 0.79
CLPX-203ENST00000558958 GRIN2DO15399 1336 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 C17orf102A2RUQ5 167 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 PPP1R3GB7ZBB8 358 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 DNM1LO00429 736 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 GJB1P08034 283 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 PRCPP42785 496 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 DNM2P50570 870 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 COBLL1Q53SF7 1204 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 NFRKBQ6P4R8 1299 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 SESTD1Q86VW0 696 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 FAM178BQ8IXR5 827 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 METTL13Q8N6R0 699 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 GLIS3Q8NEA6 775 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 GLT1D1Q96MS3 346 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 CRISPLD2Q9H0B8 497 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 MRPL44Q9H9J2 332 aaKnown RBP19.98■□□□□ 0.79
CLPX-203ENST00000558958 GTF2IRD1Q9UHL9 959 aa19.98■□□□□ 0.79
CLPX-203ENST00000558958 KAT6AQ92794 2004 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 A0A1W2PQ45 241 aaPredicted RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 A0A1W2PQY0 241 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 MAPTP10636 758 aaKnown RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 GNAT1P11488 350 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 CLCN3P51790 818 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 PEX3P56589 373 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 DMP1Q13316 513 aaPredicted RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 ZNF720Q7Z2F6 126 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 GAS2L3Q86XJ1 694 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 ADSSL1Q8N142 457 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 ASAP3Q8TDY4 903 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 SPIRE2Q8WWL2 714 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 PRPF31Q8WWY3 499 aaKnown RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 PSPC1Q8WXF1 523 aaKnown RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 IFT74Q96LB3 600 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 NTPCRQ9BSD7 190 aaKnown RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 SUCLA2Q9P2R7 463 aaPredicted RBP19.97■□□□□ 0.79
CLPX-203ENST00000558958 DACH1Q9UI36 760 aa19.97■□□□□ 0.79
CLPX-203ENST00000558958 MYH11P35749 1972 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 SGPL1O95470 568 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 CAVIN2O95810 425 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 GLRA2P23416 452 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 TMOD1P28289 359 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 NMT1P30419 496 aaKnown RBP19.96■□□□□ 0.79
CLPX-203ENST00000558958 NPTX2P47972 431 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 CASP5P51878 434 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 CT47A1Q5JQC4 288 aaPredicted RBP19.96■□□□□ 0.79
CLPX-203ENST00000558958 EPM2AIP1Q7L775 607 aaPredicted RBP19.96■□□□□ 0.79
CLPX-203ENST00000558958 U2AF1L4Q8WU68 220 aaKnown RBP19.96■□□□□ 0.79
CLPX-203ENST00000558958 VTI1AQ96AJ9 217 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 KCNG1Q9UIX4 513 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 MAPK8IP1Q9UQF2 711 aa19.96■□□□□ 0.79
CLPX-203ENST00000558958 TREHO43280 583 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 SMTNP53814 917 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 NCKAP1LP55160 1127 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 ZNF200P98182 395 aaPredicted RBP19.95■□□□□ 0.78
CLPX-203ENST00000558958 LAMTOR4Q0VGL1 99 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 ITGA7Q13683 1181 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 MXD4Q14582 209 aaPredicted RBP19.95■□□□□ 0.78
CLPX-203ENST00000558958 PPP2R5AQ15172 486 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 KIAA0319LQ8IZA0 1049 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 GUF1Q8N442 669 aaKnown RBP19.95■□□□□ 0.78
CLPX-203ENST00000558958 SLC17A8Q8NDX2 589 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 SCFD1Q8WVM8 642 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 STRA6Q9BX79 667 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 NAT10Q9H0A0 1025 aaKnown RBP19.95■□□□□ 0.78
CLPX-203ENST00000558958 ST6GALNAC4Q9H4F1 302 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 DNAH12Q6ZR08 3092 aa19.95■□□□□ 0.78
CLPX-203ENST00000558958 SMIM35A0A1B0GVV1 85 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms