RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 A0A087WZ62 844 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 LINC01553A4QN01 128 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 EDN1P05305 212 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 KCNJ6P48051 423 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 TBC1D8BQ0IIM8 1120 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 ORC2Q13416 577 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 MCTP1Q6DN14 999 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 RSPH3Q86UC2 560 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 MYOCDQ8IZQ8 938 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 POLR3CQ9BUI4 534 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 TSPYL2Q9H2G4 693 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 TCEAL9Q9UHQ7 104 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 CLIC4Q9Y696 253 aa14.15□□□□□ -0.14
RABGGTA-207ENST00000558936 C9IYK1 514 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 UPP2O95045 317 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 BAG4O95429 457 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 DARSP14868 501 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 ATF7P17544 494 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 RPA1P27694 616 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 ARL2P36404 184 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 FAM189BP81408 668 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 USP49Q70CQ1 688 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 PRPF31Q8WWY3 499 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 CEP170P1Q96L14 293 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 SUCLA2Q9P2R7 463 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 MYO7AQ13402 2215 aa14.14□□□□□ -0.15
RABGGTA-207ENST00000558936 RALGAPA2Q2PPJ7 1873 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 TTLL13PA6NNM8 815 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 MEIS3P2A8K0S8 358 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 EFCAB14O75071 495 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 RPS6KA5O75582 802 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 DGKIO75912 1065 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 EIF4BP23588 611 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 EMC2Q15006 297 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 XKR9Q5GH70 373 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 APBB2Q92870 758 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 RAD9AQ99638 391 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 SLC28A3Q9HAS3 691 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 ANKEF1Q9NU02 776 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 ZDHHC9Q9Y397 364 aa14.13□□□□□ -0.15
RABGGTA-207ENST00000558936 E9PMD0 336 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 TLL1O43897 1013 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 RPLP2P05387 115 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 GLRA2P23416 452 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 PRPHP41219 470 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 NFX1Q12986 1120 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 GRB10Q13322 594 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 PDIA5Q14554 519 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 AMHR2Q16671 573 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 RILPL1Q5EBL4 403 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 FAM102BQ5T8I3 360 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 RHPN2Q8IUC4 686 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 DAW1Q8N136 415 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 ADAM2Q99965 735 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 RGS18Q9NS28 235 aa14.12□□□□□ -0.15
RABGGTA-207ENST00000558936 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 H3BQV1 296 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 MARCH6O60337 910 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 LAMTOR4Q0VGL1 99 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 PAK2Q13177 524 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 CAPSQ13938 189 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 SF3A1Q15459 793 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 HYIQ5T013 277 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 PPP2R2DQ66LE6 453 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 LRRC55Q6ZSA7 311 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 ZNF598Q86UK7 904 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 SPRYD3Q8NCJ5 442 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 NEK9Q8TD19 979 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 USP28Q96RU2 1077 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 PRDM6Q9NQX0 595 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 DBR1Q9UK59 544 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 NOL7Q9UMY1 257 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 USP20Q9Y2K6 914 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 TCHHQ07283 1943 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
RABGGTA-207ENST00000558936 B4GALT3O60512 393 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 AMHP03971 560 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 AFF1P51825 1210 aaKnown RBP14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 ERVK-21P61565 698 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 MAPK7Q13164 816 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 CAMK1Q14012 370 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 ZBED2Q9BTP6 218 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 LRWD1Q9UFC0 647 aa14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 FBXO2Q9UK22 296 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-207ENST00000558936 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms