RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SEPT9Q9UHD8 586 aaPredicted RBP15.28■□□□□ 0.04
VPS18-203ENST00000558855 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
VPS18-203ENST00000558855 GPR182O15218 404 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 MBTPS2O43462 519 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 PFKFB2O60825 505 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 SEC24BO95487 1268 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 DARSP14868 501 aaKnown RBP15.27■□□□□ 0.04
VPS18-203ENST00000558855 JAK3P52333 1124 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 ERVFC1P60507 584 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 NONOQ15233 471 aaKnown RBP eCLIP15.27■□□□□ 0.04
VPS18-203ENST00000558855 CLLU1OSQ5K130 101 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 ANO5Q75V66 913 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.04
VPS18-203ENST00000558855 KSR1Q8IVT5 923 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 MSLNLQ96KJ4 702 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 CASD1Q96PB1 797 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 KCNMB3Q9NPA1 279 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 C1orf112Q9NSG2 853 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 TMEM161AQ9NX61 479 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
VPS18-203ENST00000558855 STK36Q9NRP7 1315 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 IGKV6-21A0A0C4DH24 114 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 MAGEB2O15479 319 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 EIF4BP23588 611 aaKnown RBP15.26■□□□□ 0.03
VPS18-203ENST00000558855 SFNP31947 248 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 NRIP1P48552 1158 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 NPEPPSP55786 919 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 NR5A1Q13285 461 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 ZNF598Q86UK7 904 aaKnown RBP15.26■□□□□ 0.03
VPS18-203ENST00000558855 ECHDC2Q86YB7 292 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 HAS1Q92839 578 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 TNFRSF25Q93038 417 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 NIFKQ9BYG3 293 aaKnown RBP15.26■□□□□ 0.03
VPS18-203ENST00000558855 DDX25Q9UHL0 483 aaKnown RBP15.26■□□□□ 0.03
VPS18-203ENST00000558855 BARX2Q9UMQ3 279 aaPredicted RBP15.26■□□□□ 0.03
VPS18-203ENST00000558855 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
VPS18-203ENST00000558855 A0A087WZ62 844 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 PER2O15055 1255 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 FGF18O76093 207 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 SSTR3P32745 418 aaPredicted RBP15.25■□□□□ 0.03
VPS18-203ENST00000558855 FOSBP53539 338 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 SPIRE1Q08AE8 756 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 TBC1D8BQ0IIM8 1120 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 ME3Q16798 604 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 MOXD1Q6UVY6 613 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 KRT25Q7Z3Z0 450 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 FDXACB1Q9BRP7 624 aaPredicted RBP15.25■□□□□ 0.03
VPS18-203ENST00000558855 C1QTNF1Q9BXJ1 281 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
VPS18-203ENST00000558855 ATP6V0A4Q9HBG4 840 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 NRBP2Q9NSY0 501 aa15.25■□□□□ 0.03
VPS18-203ENST00000558855 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
VPS18-203ENST00000558855 FSCN2O14926 492 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 ZBTB39O15060 712 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 B4GALT3O60512 393 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 JAK2O60674 1132 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 SMAD2Q15796 467 aaKnown RBP15.24■□□□□ 0.03
VPS18-203ENST00000558855 LONRF3Q496Y0 759 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 NAALADL2Q58DX5 795 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 XKR3Q5GH77 459 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 SPOUT1Q5T280 376 aaKnown RBP15.24■□□□□ 0.03
VPS18-203ENST00000558855 PIK3AP1Q6ZUJ8 805 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 EFHBQ8N7U6 833 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 RNF169Q8NCN4 708 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 RDM1Q8NG50 284 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 FEZF2Q8TBJ5 459 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 HELQQ8TDG4 1101 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 NLRP7Q8WX94 980 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 ELAC1Q9H777 363 aaKnown RBP15.24■□□□□ 0.03
VPS18-203ENST00000558855 CDH22Q9UJ99 828 aa15.24■□□□□ 0.03
VPS18-203ENST00000558855 DDX11L8A8MPP1 907 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 PPP2R5CQ13362 524 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 TMEM31Q5JXX7 168 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 NEK8Q86SG6 692 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 TMEM173Q86WV6 379 aaPredicted RBP15.23■□□□□ 0.03
VPS18-203ENST00000558855 ADHFE1Q8IWW8 467 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 LPPQ93052 612 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 TMEM117Q9H0C3 514 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 ORC3Q9UBD5 711 aaPredicted RBP15.23■□□□□ 0.03
VPS18-203ENST00000558855 CD207Q9UJ71 328 aa15.23■□□□□ 0.03
VPS18-203ENST00000558855 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 GPR37L1O60883 481 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 MAFO75444 373 aaPredicted RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 TMOD1P28289 359 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 NDUFV1P49821 464 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 SMAD4Q13485 552 aaKnown RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 KCNC3Q14003 757 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 PUS10Q3MIT2 529 aaKnown RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 PLPP4Q5VZY2 271 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 GALNT17Q6IS24 598 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms