RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TARBP2Q15633 366 aaKnown RBP13□□□□□ -0.33
CASC4-205ENST00000558735 ODR4Q5SWX8 454 aa13□□□□□ -0.33
CASC4-205ENST00000558735 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
CASC4-205ENST00000558735 B3GNT9Q6UX72 402 aa13□□□□□ -0.33
CASC4-205ENST00000558735 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
CASC4-205ENST00000558735 FBXL6Q8N531 539 aa13□□□□□ -0.33
CASC4-205ENST00000558735 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
CASC4-205ENST00000558735 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
CASC4-205ENST00000558735 PPP2R3CQ969Q6 453 aa13□□□□□ -0.33
CASC4-205ENST00000558735 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CASC4-205ENST00000558735 MBOAT7Q96N66 472 aa13□□□□□ -0.33
CASC4-205ENST00000558735 TEKT3Q9BXF9 490 aa13□□□□□ -0.33
CASC4-205ENST00000558735 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
CASC4-205ENST00000558735 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
CASC4-205ENST00000558735 CLEC1BQ9P126 229 aa13□□□□□ -0.33
CASC4-205ENST00000558735 TCEAL9Q9UHQ7 104 aa13□□□□□ -0.33
CASC4-205ENST00000558735 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
CASC4-205ENST00000558735 ZDBF2Q9HCK1 2354 aa13□□□□□ -0.33
CASC4-205ENST00000558735 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 CHMP2AO43633 222 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 OATP04181 439 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
CASC4-205ENST00000558735 SFNP31947 248 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 FOXK2Q01167 660 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 PRKCEQ02156 737 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 SCRN1Q12765 414 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
CASC4-205ENST00000558735 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
CASC4-205ENST00000558735 ZNF668Q96K58 619 aaPredicted RBP12.99□□□□□ -0.33
CASC4-205ENST00000558735 CEP89Q96ST8 783 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
CASC4-205ENST00000558735 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 C1orf112Q9NSG2 853 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 TPCN1Q9ULQ1 816 aa12.99□□□□□ -0.33
CASC4-205ENST00000558735 CSPG5O95196 566 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 EIF4BP23588 611 aaKnown RBP12.98□□□□□ -0.33
CASC4-205ENST00000558735 TMOD1P28289 359 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 JAK3P52333 1124 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 NUBP1P53384 320 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 INF2Q27J81 1249 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 MOXD1Q6UVY6 613 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 FAM177A1Q8N128 213 aaPredicted RBP12.98□□□□□ -0.33
CASC4-205ENST00000558735 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 POF1BQ8WVV4 589 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 ASIC4Q96FT7 647 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 ELAC1Q9H777 363 aaKnown RBP12.98□□□□□ -0.33
CASC4-205ENST00000558735 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
CASC4-205ENST00000558735 TMEM161AQ9NX61 479 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 AKT3Q9Y243 479 aa12.98□□□□□ -0.33
CASC4-205ENST00000558735 MYH9P35579 1960 aaKnown RBP12.98□□□□□ -0.33
CASC4-205ENST00000558735 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 TBKBP1A7MCY6 615 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 PFKFB2O60825 505 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 FGFR1P11362 822 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 ATF7P17544 494 aaPredicted RBP12.97□□□□□ -0.33
CASC4-205ENST00000558735 NDUFV1P49821 464 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 GPC3P51654 580 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 SIGLEC14Q08ET2 396 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 DRP2Q13474 957 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
CASC4-205ENST00000558735 XKR3Q5GH77 459 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 ADGRD2Q7Z7M1 963 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 MAP7D2Q96T17 732 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 SH2D3AQ9BRG2 576 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
CASC4-205ENST00000558735 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
CASC4-205ENST00000558735 CWH43Q9H720 699 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 ATP6V0A4Q9HBG4 840 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
CASC4-205ENST00000558735 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 WDR87Q6ZQQ6 2873 aa12.97□□□□□ -0.33
CASC4-205ENST00000558735 IGKV6-21A0A0C4DH24 114 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 FSD2A1L4K1 749 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 PROB1E7EW31 1015 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 EML1O00423 815 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 SLC37A4O43826 429 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 CSDE1O75534 798 aaKnown RBP12.96□□□□□ -0.33
CASC4-205ENST00000558735 GLP2RO95838 553 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 NEFLP07196 543 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 DARSP14868 501 aaKnown RBP12.96□□□□□ -0.33
CASC4-205ENST00000558735 FGFR4P22455 802 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 TBC1D8BQ0IIM8 1120 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 SUSD6Q92537 303 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 CASD1Q96PB1 797 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
CASC4-205ENST00000558735 USP15Q9Y4E8 981 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms