RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 CYP11B2P19099 503 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 MAGEA10P43363 369 aaPredicted RBP19.38■□□□□ 0.69
TPM1-214ENST00000558544 FPGSQ05932 587 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 KIZQ2M2Z5 673 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 FAM102BQ5T8I3 360 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 RINT1Q6NUQ1 792 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 RHPN2Q8IUC4 686 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 MCPH1Q8NEM0 835 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 POLR3FQ9H1D9 316 aaPredicted RBP19.38■□□□□ 0.69
TPM1-214ENST00000558544 GPRC5CQ9NQ84 441 aa19.38■□□□□ 0.69
TPM1-214ENST00000558544 MICAL3Q7RTP6 2002 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 PFKFB1P16118 471 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 CMA1P23946 247 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 GPC3P51654 580 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 NLRP11P59045 1033 aaKnown RBP19.37■□□□□ 0.69
TPM1-214ENST00000558544 DEFB128Q7Z7B8 93 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 GPBP1Q86WP2 473 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 KSR1Q8IVT5 923 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 PRPF31Q8WWY3 499 aaKnown RBP19.37■□□□□ 0.69
TPM1-214ENST00000558544 PSPC1Q8WXF1 523 aaKnown RBP19.37■□□□□ 0.69
TPM1-214ENST00000558544 DHX58Q96C10 678 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 CELF4Q9BZC1 486 aaKnown RBP19.37■□□□□ 0.69
TPM1-214ENST00000558544 OSBPL7Q9BZF2 842 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 POLD4Q9HCU8 107 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 COL4A3BPQ9Y5P4 624 aa19.37■□□□□ 0.69
TPM1-214ENST00000558544 A0A1W2PQ27 194 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 A0A1W2PQ64 194 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 A0A1W2PQD8 194 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 POLR2DO15514 142 aaKnown RBP19.36■□□□□ 0.69
TPM1-214ENST00000558544 NBNO60934 754 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 GPR32O75388 356 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 RFC2P35250 354 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 PPIGQ13427 754 aaKnown RBP eCLIP19.36■□□□□ 0.692e-10■■□□□ 11.9
TPM1-214ENST00000558544 GPNMBQ14956 572 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 E2F4Q16254 413 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 CSPP1Q1MSJ5 1256 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 C1orf186Q6ZWK4 172 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 FSIP1Q8NA03 581 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 NLRP7Q8WX94 980 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
TPM1-214ENST00000558544 NLRP4Q96MN2 994 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 SCLT1Q96NL6 688 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 OSMRQ99650 979 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 CDHR5Q9HBB8 845 aa19.36■□□□□ 0.69
TPM1-214ENST00000558544 NPHP3-ACAD11A0A0J9YXS1 232 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 GOLGA6L4A6NEF3 574 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 PARNO95453 639 aaKnown RBP19.35■□□□□ 0.69
TPM1-214ENST00000558544 ACRP10323 421 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 GHRP10912 638 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 ARL2P36404 184 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 LAMTOR4Q0VGL1 99 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 ASAP3Q8TDY4 903 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 GOLPH3LQ9H4A5 285 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 IL23AQ9NPF7 189 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 KCNH3Q9ULD8 1083 aa19.35■□□□□ 0.69
TPM1-214ENST00000558544 A0A087WZ62 844 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 HIP1RO75146 1068 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 GLRA2P23416 452 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 CRYBB1P53674 252 aaPredicted RBP19.34■□□□□ 0.69
TPM1-214ENST00000558544 EPHB4P54760 987 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 CACNB1Q02641 598 aaPredicted RBP19.34■□□□□ 0.69
TPM1-214ENST00000558544 LPIN1Q14693 890 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 ARSHQ5FYA8 562 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 FBXO47Q5MNV8 452 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 SV2BQ7L1I2 683 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 IQUBQ8NA54 791 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 TMEM40Q8WWA1 233 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 VWCEQ96DN2 955 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 FDXACB1Q9BRP7 624 aaPredicted RBP19.34■□□□□ 0.69
TPM1-214ENST00000558544 HPSEQ9Y251 543 aa19.34■□□□□ 0.69
TPM1-214ENST00000558544 PTPRSQ13332 1948 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 FAM237AA0A1B0GTK4 181 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 CXCL10P02778 98 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 KRT18P05783 430 aaKnown RBP19.33■□□□□ 0.69
TPM1-214ENST00000558544 SRGAP2CP0DJJ0 459 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 GUCY2CP25092 1073 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 NDUFA8P51970 172 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 MAPK7Q13164 816 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 CAPSQ13938 189 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 MXD4Q14582 209 aaPredicted RBP19.33■□□□□ 0.69
TPM1-214ENST00000558544 ZNF410Q86VK4 478 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 RPUSD2Q8IZ73 545 aaKnown RBP19.33■□□□□ 0.69
TPM1-214ENST00000558544 DAW1Q8N136 415 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 TMEM87AQ8NBN3 555 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 KIFAP3Q92845 792 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 GDF15Q99988 308 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 KCND2Q9NZV8 630 aa19.33■□□□□ 0.69
TPM1-214ENST00000558544 ASAP2O43150 1006 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 GADD45BO75293 160 aaPredicted RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 SYKP43405 635 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 CDC42EP1Q00587 391 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 TSHZ1Q6ZSZ6 1077 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 RNF149Q8NC42 400 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 BSNDQ8WZ55 320 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 STAMQ92783 540 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 REEP2Q9BRK0 252 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms