RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 TMTC3Q6ZXV5 915 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 ADAM2Q99965 735 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 S1PR5Q9H228 398 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 TYW1Q9NV66 732 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 GINS2Q9Y248 185 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 PCDHB12Q9Y5F1 795 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 NID2Q14112 1375 aa12.62□□□□□ -0.39
RABGGTA-204ENST00000558376 IGKV6D-21A0A0A0MT36 114 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 C9IYK1 514 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 FSCN2O14926 492 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 GADD45BO75293 160 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 FGF18O76093 207 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 CCNE2O96020 404 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 UBE3AQ05086 875 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 HEATR3Q7Z4Q2 680 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 COLGALT1Q8NBJ5 622 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 SDF4Q9BRK5 362 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 CWH43Q9H720 699 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 RGS18Q9NS28 235 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 ST3GAL5Q9UNP4 418 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 SPTBN4Q9H254 2564 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 USP34Q70CQ2 3546 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 RPS6KA5O75582 802 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 SIGLEC14Q08ET2 396 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 KCNC3Q14003 757 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 FAM86C1Q9NVL1 165 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 TMEM260Q9NX78 707 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 WDR81Q562E7 1941 aa12.61□□□□□ -0.39
RABGGTA-204ENST00000558376 ZBTB42B2RXF5 422 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 MEIS1O00470 390 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 PRPF3O43395 683 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 HBP1O60381 514 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 FGFR1P11362 822 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 ATP4AP20648 1035 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 FAM189BP81408 668 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 SYCE2Q6PIF2 218 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 ABHD15Q6UXT9 468 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
RABGGTA-204ENST00000558376 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 DEXIO95424 95 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 AVPR2P30518 371 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 DSC3Q14574 896 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CEP55Q53EZ4 464 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 TMEM184AQ6ZMB5 413 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 LRRC55Q6ZSA7 311 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 FAM228AQ86W67 206 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CCDC60Q8IWA6 550 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 THNSL1Q8IYQ7 743 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CDCA3Q99618 268 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 PRRX2Q99811 253 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 RNF26Q9BY78 433 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 RIC8AQ9NPQ8 531 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 AAASQ9NRG9 546 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 RNF19AQ9NV58 838 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 ATP6V1DQ9Y5K8 247 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 DENND3A2RUS2 1198 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 ADAMTS3O15072 1205 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 TECP42680 631 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 PLPP4Q5VZY2 271 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 ZSCAN16Q9H4T2 348 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
RABGGTA-204ENST00000558376 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 STK36Q9NRP7 1315 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 HIDE1A8MVS5 230 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 BTBD18B2RXH4 712 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 BACH1O14867 736 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 GPR182O15218 404 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 DHX15O43143 795 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 PDGFBP01127 241 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 SLC26A2P50443 739 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms