RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
HERC1-202ENST00000558324 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 EVPLQ92817 2033 aa13.38□□□□□ -0.27
HERC1-202ENST00000558324 TBX3O15119 743 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
HERC1-202ENST00000558324 DNM2P50570 870 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 NPEPPSP55786 919 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 DSC3Q14574 896 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 KLHL23Q8NBE8 558 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 LXNQ9BS40 222 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 ATP6V0A4Q9HBG4 840 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
HERC1-202ENST00000558324 WRAP73Q9P2S5 460 aaPredicted RBP13.37□□□□□ -0.27
HERC1-202ENST00000558324 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 WDR81Q562E7 1941 aa13.37□□□□□ -0.27
HERC1-202ENST00000558324 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 A0A087WZ62 844 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 H3BQ06 376 aaPredicted RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 WNT7AO00755 349 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 ITGB1P05556 798 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 DYDC2Q96IM9 177 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 FDXACB1Q9BRP7 624 aaPredicted RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 LMAN2LQ9H0V9 348 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 CYP26B1Q9NR63 512 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 TMEM161AQ9NX61 479 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 CLDND1Q9NY35 253 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 PLAGL2Q9UPG8 496 aa13.36□□□□□ -0.27
HERC1-202ENST00000558324 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
HERC1-202ENST00000558324 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
HERC1-202ENST00000558324 IGKV6-21A0A0C4DH24 114 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 NEMFO60524 1076 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.27
HERC1-202ENST00000558324 MAFO75444 373 aaPredicted RBP13.35□□□□□ -0.27
HERC1-202ENST00000558324 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
HERC1-202ENST00000558324 DNAJB1P25685 340 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
HERC1-202ENST00000558324 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 EPHA7Q15375 998 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 CALCRLQ16602 461 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 SLC7A3Q8WY07 619 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 P2RX5Q93086 422 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 GCOM2Q9BZD3 368 aaPredicted RBP13.35□□□□□ -0.27
HERC1-202ENST00000558324 IGFLR1Q9H665 355 aa13.35□□□□□ -0.27
HERC1-202ENST00000558324 ZBTB39O15060 712 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 YWHABP31946 246 aaKnown RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
HERC1-202ENST00000558324 IRS1P35568 1242 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 TXKP42681 527 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 HYAL1Q12794 435 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 CAMK1Q14012 370 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 SAFBQ15424 915 aaKnown RBP eCLIP13.34□□□□□ -0.27
HERC1-202ENST00000558324 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 FAM43BQ6ZT52 329 aaPredicted RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 TPH2Q8IWU9 490 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 THNSL1Q8IYQ7 743 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 ABI1Q8IZP0 508 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 C8orf76Q96K31 380 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 JPH2Q9BR39 696 aaPredicted RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 ELAC1Q9H777 363 aaKnown RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 TYW1Q9NV66 732 aaKnown RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
HERC1-202ENST00000558324 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 PCDHGC5Q9Y5F6 944 aa13.34□□□□□ -0.27
HERC1-202ENST00000558324 ATG2AQ2TAZ0 1938 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 IL9P15248 144 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
HERC1-202ENST00000558324 MCM7P33993 719 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 PBX3P40426 434 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 FAM189BP81408 668 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 EMC2Q15006 297 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 CLUL1Q15846 466 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 LONRF3Q496Y0 759 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 XKR9Q5GH70 373 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms