RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 EIF4BP23588 611 aaKnown RBP17.48■□□□□ 0.39
TPM1-211ENST00000558314 PBX3P40426 434 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 ZP2Q05996 745 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 SCRN1Q12765 414 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 ADAM15Q13444 863 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 DRP2Q13474 957 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 DSC3Q14574 896 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 COL19A1Q14993 1142 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 CSPP1Q1MSJ5 1256 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 CTC1Q2NKJ3 1217 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 PLPP4Q5VZY2 271 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 KRT25Q7Z3Z0 450 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 FAM122AQ96E09 287 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 TLR9Q9NR96 1032 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 BARX2Q9UMQ3 279 aaPredicted RBP17.48■□□□□ 0.39
TPM1-211ENST00000558314 ATG2AQ2TAZ0 1938 aa17.48■□□□□ 0.39
TPM1-211ENST00000558314 SLC37A4O43826 429 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 ALADP13716 330 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 DARSP14868 501 aaKnown RBP17.47■□□□□ 0.39
TPM1-211ENST00000558314 DNM2P50570 870 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 FOSBP53539 338 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 SMAD4Q13485 552 aaKnown RBP17.47■□□□□ 0.39
TPM1-211ENST00000558314 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 ADHFE1Q8IWW8 467 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 TMEM117Q9H0C3 514 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 C11orf16Q9NQ32 467 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 ENTPD7Q9NQZ7 604 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 BMP2KQ9NSY1 1161 aaPredicted RBP17.47■□□□□ 0.39
TPM1-211ENST00000558314 GJB4Q9NTQ9 266 aa17.47■□□□□ 0.39
TPM1-211ENST00000558314 HOXA2O43364 376 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 CCNT1O60563 726 aaKnown RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 GPR37L1O60883 481 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 XBP1P17861 261 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 LAG3P18627 525 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 ERVFC1P60507 584 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 FAM189BP81408 668 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 RBM10P98175 930 aaKnown RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 PLA2G4FQ68DD2 849 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 PIK3AP1Q6ZUJ8 805 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 ECHDC2Q86YB7 292 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 RHPN2Q8IUC4 686 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 EFHBQ8N7U6 833 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 DAGLBQ8NCG7 672 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 NLRP4Q96MN2 994 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 CWH43Q9H720 699 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 ELAC1Q9H777 363 aaKnown RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 PRKAG3Q9UGI9 489 aa17.46■□□□□ 0.39
TPM1-211ENST00000558314 PUF60Q9UHX1 559 aaKnown RBP17.46■□□□□ 0.39
TPM1-211ENST00000558314 CYP3A7-CYP3A51PA0A087WV96 503 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 A0A087WZ62 844 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 DCXO43602 365 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 CYP3A7P24462 503 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 NPY5RQ15761 445 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
TPM1-211ENST00000558314 LLGL2Q6P1M3 1020 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 RDM1Q8NG50 284 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 HELQQ8TDG4 1101 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 CASD1Q96PB1 797 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 FDXACB1Q9BRP7 624 aaPredicted RBP17.45■□□□□ 0.38
TPM1-211ENST00000558314 APOL5Q9BWW9 433 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 CLEC1BQ9P126 229 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
TPM1-211ENST00000558314 M0R2N6 131 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 EML1O00423 815 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 PSMC5P62195 406 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 UBE3AQ05086 875 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 TARBP2Q15633 366 aaKnown RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 TWF2Q6IBS0 349 aaKnown RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 NCAPH2Q6IBW4 605 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 KCNT2Q6UVM3 1135 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 LRRC55Q6ZSA7 311 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 NEK8Q86SG6 692 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 KSR1Q8IVT5 923 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 OXER1Q8TDS5 423 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 POP1Q99575 1024 aaKnown RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 TCF25Q9BQ70 676 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 NIFKQ9BYG3 293 aaKnown RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 PIN4Q9Y237 131 aaKnown RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 FNDC1Q4ZHG4 1894 aaPredicted RBP17.44■□□□□ 0.38
TPM1-211ENST00000558314 PLXNA4Q9HCM2 1894 aa17.44■□□□□ 0.38
TPM1-211ENST00000558314 NT5C1B-RDH14C9J2C7 533 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 GLP2RO95838 553 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 NPEPPSP55786 919 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 KRT17Q04695 432 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 MOXD1Q6UVY6 613 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms