RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 RHOXF2BP0C7M4 288 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 LMNB1P20700 586 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 DNAJB2P25686 324 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PON1P27169 355 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 HOXA13P31271 388 aaPredicted RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 SFNP31947 248 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 STAT1P42224 750 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 ECE1P42892 770 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 PSMC6P62333 389 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 JAG1P78504 1218 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 RAPGEF1Q13905 1077 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 RRP1BQ14684 758 aaKnown RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PCNX4Q63HM2 1172 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 FAM186BQ8IYM0 893 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 GLIS3Q8NEA6 775 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 ACER1Q8TDN7 264 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 TBC1D5Q92609 795 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 HVCN1Q96D96 273 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 BORCS6Q96GS4 357 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PBKQ96KB5 322 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 OSBPL9Q96SU4 736 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PNKPQ96T60 521 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 MMS19Q96T76 1030 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 RHOXF2Q9BQY4 288 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 SELENOOQ9BVL4 669 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 STK33Q9BYT3 514 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 ABCB6Q9NP58 842 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 CALCOCO1Q9P1Z2 691 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 LARSQ9P2J5 1176 aaKnown RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 ZNF646O15015 1829 aaPredicted RBP9.09□□□□□ -0.95
SPG11-209ENST00000558253 ARFGEF1Q9Y6D6 1849 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 MYH7BA7E2Y1 1941 aa9.09□□□□□ -0.95
SPG11-209ENST00000558253 PSME4Q14997 1843 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 EML1O00423 815 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 ENC1O14682 589 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 TLR2O60603 784 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 ZBED4O75132 1171 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 SASH3O75995 380 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 SEC31AO94979 1220 aaKnown RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 PLEKP08567 350 aaPredicted RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 MYBP10242 640 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 KRT13P13646 458 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 OAS2P29728 719 aaKnown RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 CYP2C19P33261 490 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 HOXD13P35453 343 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 JAK3P52333 1124 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 OAZ1P54368 228 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 NAP1L1P55209 391 aaKnown RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 ZNF280AP59817 542 aaPredicted RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 VSNL1P62760 191 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 APBA1Q02410 837 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 RASSF7Q02833 373 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 GFPT1Q06210 699 aaPredicted RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 CASP8Q14790 479 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 PPP2R5EQ16537 467 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 KIAA0753Q2KHM9 967 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 MEI1Q5TIA1 1274 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 ALS2CLQ60I27 953 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 DCAF15Q66K64 600 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 CIAPIN1Q6FI81 312 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 EMBQ6PCB8 327 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 IRF2BP2Q7Z5L9 587 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 SPICE1Q8N0Z3 855 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 NOA1Q8NC60 698 aaKnown RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 SPATA4Q8NEY3 305 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 TAF4BQ92750 862 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 GJA10Q969M2 543 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 SLC35C1Q96A29 364 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 DYDC2Q96IM9 177 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 RUSC1Q9BVN2 902 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 STRA6Q9BX79 667 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 NLRC4Q9NPP4 1024 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 ANKEF1Q9NU02 776 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 PIM2Q9P1W9 311 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 CCPG1Q9ULG6 757 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 EXOC7Q9UPT5 735 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 USP20Q9Y2K6 914 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 CTDP1Q9Y5B0 961 aaPredicted RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 UBIAD1Q9Y5Z9 338 aa9.08□□□□□ -0.96
SPG11-209ENST00000558253 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
SPG11-209ENST00000558253 ASTN1O14525 1302 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 ADAMTSL1Q8N6G6 1762 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 SCN9AQ15858 1988 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 CLRN2A0PK11 232 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 H0YCG3 227 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 TGFB1I1O43294 461 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 STAM2O75886 525 aa9.07□□□□□ -0.96
SPG11-209ENST00000558253 RAD17O75943 681 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms