RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 WDR81Q562E7 1941 aa11.39□□□□□ -0.59
USP3-207ENST00000558218 SIP14410 1827 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 TDP2O95551 362 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 FDPSP14324 419 aaKnown RBP11.38□□□□□ -0.59
USP3-207ENST00000558218 PPP2R5CQ13362 524 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 TARBP2Q15633 366 aaKnown RBP11.38□□□□□ -0.59
USP3-207ENST00000558218 INF2Q27J81 1249 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 EPC2Q52LR7 807 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 NAALADL2Q58DX5 795 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 EFCAB12Q6NXP0 572 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 NPAS4Q8IUM7 802 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 TMEM192Q8IY95 271 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 METTL13Q8N6R0 699 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 LINC01465Q8N7H1 131 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
USP3-207ENST00000558218 MAP7D2Q96T17 732 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 JPH2Q9BR39 696 aaPredicted RBP11.38□□□□□ -0.59
USP3-207ENST00000558218 PLVAPQ9BX97 442 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 UNC45AQ9H3U1 944 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 RC3H2Q9HBD1 1191 aaKnown RBP11.38□□□□□ -0.59
USP3-207ENST00000558218 ERVK-5Q9HDB9 667 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 KCNMB3Q9NPA1 279 aa11.38□□□□□ -0.59
USP3-207ENST00000558218 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 NCK2O43639 380 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 ZNF862O60290 1169 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 GPR32O75388 356 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 BAG4O95429 457 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 KRT2P35908 639 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 BMPR1AP36894 532 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 DNM2P50570 870 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 PSMC5P62195 406 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 FAM189BP81408 668 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 LETM2Q2VYF4 491 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 SLFN12Q8IYM2 578 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 CMTR2Q8IYT2 770 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 TATDN2Q93075 761 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 HLA-CQ95604 372 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 ZBTB10Q96DT7 871 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 MRPL38Q96DV4 380 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 UIMC1Q96RL1 719 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 LLPHQ9BRT6 129 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 C17orf80Q9BSJ5 609 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 ELAC1Q9H777 363 aaKnown RBP11.37□□□□□ -0.59
USP3-207ENST00000558218 RGS18Q9NS28 235 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 LOXHD1Q8IVV2 1947 aa11.37□□□□□ -0.59
USP3-207ENST00000558218 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 IGKV6-21A0A0C4DH24 114 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 STBD1O95210 358 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 P4HBP07237 508 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 EIF4BP23588 611 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 SARSP49591 514 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 PRKCEQ02156 737 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 GPM6BQ13491 265 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 TRIM29Q14134 588 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 BTG3Q14201 252 aaPredicted RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 PIK3AP1Q6ZUJ8 805 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 P2RX5Q93086 422 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 C11orf84Q9BUA3 381 aaPredicted RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 ADAMTS10Q9H324 1103 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 TMX1Q9H3N1 280 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 PRDM6Q9NQX0 595 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 MTUS1Q9ULD2 1270 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 NOC2LQ9Y3T9 749 aaKnown RBP11.36□□□□□ -0.59
USP3-207ENST00000558218 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 RALGAPA2Q2PPJ7 1873 aa11.36□□□□□ -0.59
USP3-207ENST00000558218 CHD7Q9P2D1 2997 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.35□□□□□ -0.59
USP3-207ENST00000558218 CHMP2AO43633 222 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 MARCH6O60337 910 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
USP3-207ENST00000558218 MMP1P03956 469 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 BMP1P13497 986 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 NLRP11P59045 1033 aaKnown RBP11.35□□□□□ -0.59
USP3-207ENST00000558218 PTGDRQ13258 359 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 EPHA7Q15375 998 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 TIGD5Q53EQ6 642 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 OTUD6AQ7L8S5 288 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 SPRED2Q7Z698 418 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 NECAB1Q8N987 351 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 GDPD5Q8WTR4 605 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 TMEM40Q8WWA1 233 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms