RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 H7C1D1 291 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 OPA1O60313 960 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 RAPGEF3O95398 923 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 DPTQ07507 201 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 TCIRG1Q13488 830 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 SAFB2Q14151 953 aaKnown RBP eCLIP4.29□□□□□ -1.72
GPHN-216ENST00000557678 ZNF174Q15697 407 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 DGKDQ16760 1214 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 ARHGAP44Q17R89 818 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 TRIM61Q5EBN2 209 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 SOGA3Q5TF21 947 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 SPTY2D1Q68D10 685 aaPredicted RBP4.29□□□□□ -1.72
GPHN-216ENST00000557678 SLFN12LQ6IEE8 588 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 ZNF662Q6ZS27 426 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 GAREM2Q75VX8 874 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 LPPQ93052 612 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 FOXB1Q99853 325 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 SLC6A15Q9H2J7 730 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 IKZF4Q9H2S9 585 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 CABP5Q9NP86 173 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 SAMD15Q9P1V8 674 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 CTDP1Q9Y5B0 961 aaPredicted RBP4.29□□□□□ -1.72
GPHN-216ENST00000557678 PTCH2Q9Y6C5 1203 aa4.29□□□□□ -1.72
GPHN-216ENST00000557678 B4E1Z4 1266 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 DAPK3O43293 454 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 APOL3O95236 402 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 KCNA6P17658 529 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 ADCY7P51828 1080 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 INHBCP55103 352 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 INHBEP58166 350 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
GPHN-216ENST00000557678 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
GPHN-216ENST00000557678 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 TTC38Q5R3I4 469 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 RTN4RL1Q86UN2 441 aaPredicted RBP4.28□□□□□ -1.72
GPHN-216ENST00000557678 TMPRSS6Q8IU80 811 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 OR5AN1Q8NGI8 311 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 ARL8AQ96BM9 186 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 MIEF2Q96C03 454 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 ARMC5Q96C12 935 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 NCOA5Q9HCD5 579 aaKnown RBP4.28□□□□□ -1.72
GPHN-216ENST00000557678 ACSS2Q9NR19 701 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 HECAQ9UBI9 543 aaPredicted RBP4.28□□□□□ -1.72
GPHN-216ENST00000557678 DNAI1Q9UI46 699 aa4.28□□□□□ -1.72
GPHN-216ENST00000557678 UBE2QL1A1L167 161 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 PTPDC1A2A3K4 754 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 GLRX3O76003 335 aaKnown RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 PRLP01236 227 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 ZBTB48P10074 688 aaPredicted RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 IGFALSP35858 605 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 MAN2A2P49641 1150 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 ANTXR2P58335 489 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 RBL2Q08999 1139 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 FSTL1Q12841 308 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 ZCCHC8Q6NZY4 707 aaKnown RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 FAM111BQ6SJ93 734 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 Q6ZRM9 215 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 BCL6BQ8N143 479 aaPredicted RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 MB21D1Q8N884 522 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 CHST14Q8NCH0 376 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 LARP4BQ92615 738 aaKnown RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 RPGRQ92834 1020 aaKnown RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 FOXRED1Q96CU9 486 aaPredicted RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 PGBD4Q96DM1 585 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 DYDC2Q96IM9 177 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 MAML3Q96JK9 1138 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 WDR92Q96MX6 357 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 C8orf37Q96NL8 207 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 TCF25Q9BQ70 676 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 POLR3BQ9NW08 1133 aaPredicted RBP4.27□□□□□ -1.73
GPHN-216ENST00000557678 CEP72Q9P209 647 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 SYNPO2Q9UMS6 1093 aa4.27□□□□□ -1.73
GPHN-216ENST00000557678 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 C2orf78A6NCI8 922 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 PLD2O14939 933 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 RAMP2O60895 175 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 FAM20BO75063 409 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 PPFIA2O75334 1257 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 FLT3P36888 993 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 FNTBP49356 437 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 SCNN1GP51170 649 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 FKBP15Q5T1M5 1219 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 PIK3R6Q5UE93 754 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 FNDC7Q5VTL7 733 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 UBE2R2Q712K3 238 aaPredicted RBP4.26□□□□□ -1.73
GPHN-216ENST00000557678 OTOP1Q7RTM1 612 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 AMER2Q8N7J2 671 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 KIAA1958Q8N8K9 716 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 MKL1Q969V6 931 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 GPHA2Q96T91 129 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 DNAJC2Q99543 621 aaKnown RBP4.26□□□□□ -1.73
GPHN-216ENST00000557678 GPR87Q9BY21 358 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 EPC1Q9H2F5 836 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 ZNF703Q9H7S9 590 aaPredicted RBP4.26□□□□□ -1.73
GPHN-216ENST00000557678 NRDE2Q9H7Z3 1164 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 TRIM39Q9HCM9 518 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 IL23AQ9NPF7 189 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 KCMF1Q9P0J7 381 aa4.26□□□□□ -1.73
GPHN-216ENST00000557678 MFAP3LO75121 409 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms