RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 XBP1P17861 261 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 TMOD1P28289 359 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 SARSP49591 514 aaKnown RBP11.93□□□□□ -0.5
PSMC6-215ENST00000557517 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
PSMC6-215ENST00000557517 ME3Q16798 604 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 KIZQ2M2Z5 673 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 TMEM266Q2M3C6 531 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 NAALADL2Q58DX5 795 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 TRMT1LQ7Z2T5 733 aaKnown RBP11.93□□□□□ -0.5
PSMC6-215ENST00000557517 ALYREFQ86V81 257 aaKnown RBP11.93□□□□□ -0.5
PSMC6-215ENST00000557517 CMTR2Q8IYT2 770 aaKnown RBP11.93□□□□□ -0.5
PSMC6-215ENST00000557517 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 P2RX5Q93086 422 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 FAM20AQ96MK3 541 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 LMAN2LQ9H0V9 348 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 CD320Q9NPF0 282 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 C1orf112Q9NSG2 853 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 PLAGL2Q9UPG8 496 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 PTPRSQ13332 1948 aa11.93□□□□□ -0.5
PSMC6-215ENST00000557517 IGKV6-21A0A0C4DH24 114 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 C9IYK1 514 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 TBX3O15119 743 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 GRM6O15303 877 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 MGEA5O60502 916 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 VTNP04004 478 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 EIF4BP23588 611 aaKnown RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 CAMK1Q14012 370 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 DSC3Q14574 896 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 UGCGQ16739 394 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 INF2Q27J81 1249 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 LEXMQ3ZCV2 418 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 XKR3Q5GH77 459 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 NEK9Q8TD19 979 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 ADAM2Q99965 735 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 C11orf84Q9BUA3 381 aaPredicted RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 UBE2ZQ9H832 354 aaPredicted RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
PSMC6-215ENST00000557517 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
PSMC6-215ENST00000557517 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 CHMP2AO43633 222 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 NCK2O43639 380 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
PSMC6-215ENST00000557517 CTNNB1P35222 781 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 PRKCEQ02156 737 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 PPP2R5CQ13362 524 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 TIGD5Q53EQ6 642 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 MIER3Q7Z3K6 550 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 FAM228AQ86W67 206 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
PSMC6-215ENST00000557517 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 WASF1Q92558 559 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 HAS1Q92839 578 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 TNFRSF25Q93038 417 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 OSMRQ99650 979 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 NSUN3Q9H649 340 aaKnown RBP11.91□□□□□ -0.5
PSMC6-215ENST00000557517 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
PSMC6-215ENST00000557517 PCDHGA4Q9Y5G9 962 aa11.91□□□□□ -0.5
PSMC6-215ENST00000557517 MRPL42Q9Y6G3 142 aaKnown RBP11.91□□□□□ -0.5
PSMC6-215ENST00000557517 CCDC194A0A1B0GVG4 234 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 EML1O00423 815 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 SLC37A4O43826 429 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 MAFO75444 373 aaPredicted RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 GPC3P51654 580 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 CLCN3P51790 818 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 NEK4P51957 841 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 PSMC5P62195 406 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 TBC1D8BQ0IIM8 1120 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 FAM102BQ5T8I3 360 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 PIK3AP1Q6ZUJ8 805 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 ANO5Q75V66 913 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 SPPL3Q8TCT6 385 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 GTF3C6Q969F1 213 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 PABPC5Q96DU9 382 aaKnown RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 MAP7D2Q96T17 732 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 ALG13Q9NP73 1137 aaKnown RBP11.9□□□□□ -0.5
PSMC6-215ENST00000557517 TMEM161AQ9NX61 479 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 VAV3Q9UKW4 847 aa11.9□□□□□ -0.5
PSMC6-215ENST00000557517 ZDBF2Q9HCK1 2354 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
PSMC6-215ENST00000557517 DTNBO60941 627 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 MMP1P03956 469 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 P4HBP07237 508 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms