RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
RDH11-210ENST00000557331 PRR23AA6NEV1 266 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 SMCO2A6NFE2 343 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 C2orf71A6NGG8 1288 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 HIDE1A8MVS5 230 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 C22orf31O95567 290 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
RDH11-210ENST00000557331 RCAN1P53805 252 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 SWSAP1Q6NVH7 229 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 OTOP3Q7RTS5 596 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 TMEM40Q8WWA1 233 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 ZBTB10Q96DT7 871 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 OSMRQ99650 979 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 RTP3Q9BQQ7 232 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 TRAIPQ9BWF2 469 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 FAM86C1Q9NVL1 165 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 BARHL2Q9NY43 387 aa11.58□□□□□ -0.56
RDH11-210ENST00000557331 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 ZBTB42B2RXF5 422 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CXCL14O95715 111 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CCNE2O96020 404 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 FGFR1P11362 822 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 GSPT1P15170 499 aaKnown RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 NLRP11P59045 1033 aaKnown RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 NONOQ15233 471 aaKnown RBP eCLIP11.57□□□□□ -0.56
RDH11-210ENST00000557331 LLGL2Q6P1M3 1020 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CYP26C1Q6V0L0 522 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CCDC60Q8IWA6 550 aaPredicted RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 SLC39A11Q8N1S5 342 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 BORCS6Q96GS4 357 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 ZNF577Q9BSK1 485 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 INO80BQ9C086 356 aaPredicted RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 CYP26B1Q9NR63 512 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 DBR1Q9UK59 544 aaKnown RBP11.57□□□□□ -0.56
RDH11-210ENST00000557331 AKT3Q9Y243 479 aa11.57□□□□□ -0.56
RDH11-210ENST00000557331 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 DHX15O43143 795 aaKnown RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 BRD1O95696 1058 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 GNA11P29992 359 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 CLK2P49760 499 aaKnown RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 DNM2P50570 870 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 APOBRQ0VD83 1088 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 DDX53Q86TM3 631 aaKnown RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 MICU3Q86XE3 530 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 CMTR1Q8N1G2 835 aaKnown RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 POMKQ9H5K3 350 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 IGSF9Q9P2J2 1179 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
RDH11-210ENST00000557331 V9GY48 417 aaPredicted RBP11.56□□□□□ -0.56
RDH11-210ENST00000557331 ESYT2A0FGR8 921 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 WDR64B1ANS9 1081 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 ZBTB43O43298 467 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 VTNP04004 478 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 CTSAP10619 480 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 DARSP14868 501 aaKnown RBP11.55□□□□□ -0.56
RDH11-210ENST00000557331 SFNP31947 248 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 RAB27AP51159 221 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 TDGQ13569 410 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 RTN1Q16799 776 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 ZNF598Q86UK7 904 aaKnown RBP11.55□□□□□ -0.56
RDH11-210ENST00000557331 CABP7Q86V35 215 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 TMEM105Q8N8V8 129 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 NXPE3Q969Y0 559 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 SCLT1Q96NL6 688 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 EMILIN2Q9BXX0 1053 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 RHOBTB2Q9BYZ6 727 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 GCOM2Q9BZD3 368 aaPredicted RBP11.55□□□□□ -0.56
RDH11-210ENST00000557331 ADAMTS10Q9H324 1103 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 SFXN1Q9H9B4 322 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 C6orf50Q9HD87 102 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 LIMD1Q9UGP4 676 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 SAMM50Q9Y512 469 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 TAF6LQ9Y6J9 622 aa11.55□□□□□ -0.56
RDH11-210ENST00000557331 DCHS1Q96JQ0 3298 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 IGLV3-22A0A075B6J6 115 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
RDH11-210ENST00000557331 hCG_1642624A0A1W2PR95 340 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 FAM86B1E9PN63 330 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 RBAK-RBAKDNI3L0D1 243 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 DDX39AO00148 427 aaKnown RBP11.54□□□□□ -0.56
RDH11-210ENST00000557331 SLC27A2O14975 620 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 ZNF623O75123 536 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 C1RP00736 705 aa11.54□□□□□ -0.56
RDH11-210ENST00000557331 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
RDH11-210ENST00000557331 HMGB1P09429 215 aaKnown RBP11.54□□□□□ -0.56
RDH11-210ENST00000557331 FAM86B2P0C5J1 330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms