RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KCNK12Q9HB15 430 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 ZNF302Q9NR11 478 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 DZANK1Q9NVP4 752 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 DUSP12Q9UNI6 340 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 MAFBQ9Y5Q3 323 aaPredicted RBP14.29□□□□□ -0.12
PSEN1-221ENST00000557293 WDR87Q6ZQQ6 2873 aa14.29□□□□□ -0.12
PSEN1-221ENST00000557293 KRBA1A5PL33 1030 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 DDX39AO00148 427 aaKnown RBP14.28□□□□□ -0.12
PSEN1-221ENST00000557293 BACH1O14867 736 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 NARSO43776 548 aaKnown RBP14.28□□□□□ -0.12
PSEN1-221ENST00000557293 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
PSEN1-221ENST00000557293 KRT37O76014 449 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
PSEN1-221ENST00000557293 NLRP11P59045 1033 aaKnown RBP14.28□□□□□ -0.12
PSEN1-221ENST00000557293 FAM160B1Q5W0V3 765 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 PDXDC2PQ6P474 469 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 DENND4AQ7Z401 1863 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 KIAA2013Q8IYS2 634 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 SIX5Q8N196 739 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 VN1R3Q9BXE9 311 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 R4GN57 208 aa14.28□□□□□ -0.12
PSEN1-221ENST00000557293 SH2B2O14492 632 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 CTSAP10619 480 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 FGFR4P22455 802 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 EIF4BP23588 611 aaKnown RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 CHMLP26374 656 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 CLCN3P51790 818 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 DGLUCYQ7Z3D6 616 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 METTL13Q8N6R0 699 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 MAP4K1Q92918 833 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 MTA3Q9BTC8 594 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 ANO3Q9BYT9 981 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.13
PSEN1-221ENST00000557293 RIC8AQ9NPQ8 531 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 DLL3Q9NYJ7 618 aa14.27□□□□□ -0.13
PSEN1-221ENST00000557293 DMXL1Q9Y485 3027 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 PRC1O43663 620 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 LILRB3O75022 631 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 SREBF1P36956 1147 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 ALDH7A1P49419 539 aaKnown RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 CLK2P49760 499 aaKnown RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 TMTC3Q6ZXV5 915 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 NIPA1Q7RTP0 329 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 OTOP3Q7RTS5 596 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 DCLK2Q8N568 766 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 RSAD2Q8WXG1 361 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 ACSF2Q96CM8 615 aaPredicted RBP14.26□□□□□ -0.13
PSEN1-221ENST00000557293 IGSF21Q96ID5 467 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 DLGAP2Q9P1A6 1054 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 WNT16Q9UBV4 365 aa14.26□□□□□ -0.13
PSEN1-221ENST00000557293 ADAMTS3O15072 1205 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 B4GALT3O60512 393 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
PSEN1-221ENST00000557293 FOSP01100 380 aaPredicted RBP14.25□□□□□ -0.13
PSEN1-221ENST00000557293 GALTP07902 379 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 DARSP14868 501 aaKnown RBP14.25□□□□□ -0.13
PSEN1-221ENST00000557293 FUT2Q10981 343 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 PUM1Q14671 1186 aaKnown RBP eCLIP14.25□□□□□ -0.13
PSEN1-221ENST00000557293 EFCAB12Q6NXP0 572 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 MIS18BP1Q6P0N0 1132 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 TRMT1LQ7Z2T5 733 aaKnown RBP14.25□□□□□ -0.13
PSEN1-221ENST00000557293 HEATR3Q7Z4Q2 680 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 PLA2G4DQ86XP0 818 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 FANCBQ8NB91 859 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 KCNG4Q8TDN1 519 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 TMEM169Q96HH4 297 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 KLHL5Q96PQ7 755 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 NCOR2Q9Y618 2525 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 OTOGLQ3ZCN5 2332 aa14.25□□□□□ -0.13
PSEN1-221ENST00000557293 MEIS3P2A8K0S8 358 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 MAGEB2O15479 319 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF862O60290 1169 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CA8P35219 290 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 LIFRP42702 1097 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 GPC3P51654 580 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CLCN4P51793 760 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 PTPN14Q15678 1187 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CABP7Q86V35 215 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 SLC44A3Q8N4M1 653 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 RIN2Q8WYP3 895 aaPredicted RBP14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CNTNAP3BQ96NU0 1288 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms