RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PHKA1P46020 1223 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 FKBP14Q9NWM8 211 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DDX56Q9NY93 547 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 KLHL20Q9Y2M5 609 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 MED23Q9ULK4 1368 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 PITPNM2Q9BZ72 1349 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 CTIFO43310 598 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 IL6P05231 212 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 TAP1Q03518 808 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ILF2Q12905 390 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 SMCR8Q8TEV9 937 aaPredicted RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NRBP2Q9NSY0 501 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 SYDE1Q6ZW31 735 aaPredicted RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 CDC26Q8NHZ8 85 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 GDAP1Q8TB36 358 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ING3Q9NXR8 418 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DDX25Q9UHL0 483 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 POLR2FP61218 127 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 NCALDP61601 193 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 DCTN2Q13561 401 aaKnown RBP9.38□□□□□ -0.91
SYNE3-205ENST00000557275 PIK3CDO00329 1044 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 COG2Q14746 738 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 CALN1Q9BXU9 219 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 SBNO1A3KN83 1393 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 MYH6P13533 1939 aa9.38□□□□□ -0.91
SYNE3-205ENST00000557275 ABL1P00519 1130 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 CAPN12Q6ZSI9 719 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 HMG20AQ9NP66 347 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 RAD23BP54727 409 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 C19orf18Q8NEA5 215 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 TRAPPC8Q9Y2L5 1435 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SMAPO00193 183 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 GUCA1AP43080 201 aaPredicted RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PPIDQ08752 370 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 LRRC31Q6UY01 552 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SEMA3EO15041 775 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 H2AFYO75367 372 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SEPT1Q8WYJ6 367 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MCRS1Q96EZ8 462 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ADD3Q9UEY8 706 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 LCA5LO95447 670 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MYCLP12524 364 aaPredicted RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 NR2F2P24468 414 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 COBLO75128 1261 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 HNMTP50135 292 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SDE2Q6IQ49 451 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 TOGARAM2Q6ZUX3 1019 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 KRT78Q8N1N4 520 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 BBS2Q9BXC9 721 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 NMRK1Q9NWW6 199 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 DNAJC12Q9UKB3 198 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PFASO15067 1338 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ZMYM6O95789 1325 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SLC27A2O14975 620 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 RXRGP48443 463 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 OTUD7BQ6GQQ9 843 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 CLEC4FQ8N1N0 589 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 CNOT6LQ96LI5 555 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 ANO3Q9BYT9 981 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 TBK1Q9UHD2 729 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 FANCAO15360 1455 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MXD4Q14582 209 aaPredicted RBP9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MESDQ14696 234 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 SGSM1Q2NKQ1 1148 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 C3orf20Q8ND61 904 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 OMA1Q96E52 524 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 IMPAD1Q9NX62 359 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 RWDD2AQ9UIY3 292 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 TRPM2O94759 1503 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 MBD4O95243 580 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 TFDP2Q14188 446 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 FAM26FQ5R3K3 315 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 BLIDQ8IZY5 108 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PROM2Q8N271 834 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 KLHL2O95198 593 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
SYNE3-205ENST00000557275 PMF1Q6P1K2 205 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 P3H2Q8IVL5 708 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 ATAD3AQ9NVI7 634 aa9.36□□□□□ -0.91
SYNE3-205ENST00000557275 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms