RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 MYBP10242 640 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 CTSAP10619 480 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 KCNA2P16389 499 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 ALDH7A1P49419 539 aaKnown RBP14.39□□□□□ -0.11
PSEN1-220ENST00000557037 STARD6P59095 220 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 SHC2P98077 582 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
PSEN1-220ENST00000557037 DSC3Q14574 896 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 NLRX1Q86UT6 975 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
PSEN1-220ENST00000557037 PATJQ8NI35 1801 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 C1QTNF9BB2RNN3 333 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 C1QTNF9P0C862 333 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 KLRC2P26717 231 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 WTAPQ15007 396 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 ODR4Q5SWX8 454 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 PPFIBP1Q86W92 1011 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 HELQQ8TDG4 1101 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
PSEN1-220ENST00000557037 ESR2Q92731 530 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 MTMR8Q96EF0 704 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 SHDQ96IW2 340 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 OSMRQ99650 979 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 WDR6Q9NNW5 1121 aaKnown RBP14.38□□□□□ -0.11
PSEN1-220ENST00000557037 SLC2A4RGQ9NR83 387 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 RAB23Q9ULC3 237 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 IRAK3Q9Y616 596 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 SDK1Q7Z5N4 2213 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 CLUHO75153 1309 aa14.38□□□□□ -0.11
PSEN1-220ENST00000557037 ASPMQ8IZT6 3477 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 KLRF2D3W0D1 207 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 SSBP05455 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
PSEN1-220ENST00000557037 GIT2Q14161 759 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 KIZQ2M2Z5 673 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
PSEN1-220ENST00000557037 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 BCL7CQ8WUZ0 217 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-220ENST00000557037 STAMQ92783 540 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 NELL1Q92832 810 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 NXPE3Q969Y0 559 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 KLHL5Q96PQ7 755 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 PIGSQ96S52 555 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 ASH1LQ9NR48 2969 aaKnown RBP14.37□□□□□ -0.11
PSEN1-220ENST00000557037 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
PSEN1-220ENST00000557037 LAMA4Q16363 1823 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 HELZ2Q9BYK8 2649 aaKnown RBP14.36□□□□□ -0.11
PSEN1-220ENST00000557037 RALGAPA1Q6GYQ0 2036 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 EVPLQ92817 2033 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 CCDC195A0A1B0GUA6 201 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 ZC3H11AO75152 810 aaKnown RBP eCLIP14.36□□□□□ -0.11
PSEN1-220ENST00000557037 CD72P21854 359 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 KLRC1P26715 233 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 CLCN4P51793 760 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-220ENST00000557037 GPC5P78333 572 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 HTR4Q13639 388 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 PRR23CQ6ZRP0 262 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 ENAHQ8N8S7 591 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-220ENST00000557037 PI4K2BQ8TCG2 481 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 RPP25Q9BUL9 199 aaKnown RBP14.36□□□□□ -0.11
PSEN1-220ENST00000557037 AZI2Q9H6S1 392 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 MAN1C1Q9NR34 630 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
PSEN1-220ENST00000557037 CNPP09543 421 aaKnown RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 LAMP2P13473 410 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 IL31Q6EBC2 164 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 LAIR1Q6GTX8 287 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 UNQ6494/PRO21346Q6UXR6 183 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 PRR23BQ6ZRT6 265 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 FAM43BQ6ZT52 329 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 GET4Q7L5D6 327 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 IQCA1Q86XH1 822 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 OTUD7AQ8TE49 926 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 DDX1Q92499 740 aaKnown RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 IGSF21Q96ID5 467 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 ZSCAN10Q96SZ4 725 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-220ENST00000557037 VN1R3Q9BXE9 311 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 EMILIN2Q9BXX0 1053 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 NAV2Q8IVL1 2488 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 NBEAQ8NFP9 2946 aa14.35□□□□□ -0.11
PSEN1-220ENST00000557037 ANHXE9PGG2 379 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 INPPL1O15357 1258 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 RFPL2O75678 378 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 NCLP19338 710 aaKnown RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 MLF2Q15773 248 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 LRSAM1Q6UWE0 723 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 CMASQ8NFW8 434 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 SMARCC2Q8TAQ2 1214 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms