RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ME1P48163 572 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 DNM2P50570 870 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 GPC3P51654 580 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 LPIN1Q14693 890 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 FBXO47Q5MNV8 452 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 OTOP2Q7RTS6 562 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 RHPN2Q8IUC4 686 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 KSR1Q8IVT5 923 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 TMEM40Q8WWA1 233 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 SCLT1Q96NL6 688 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 RCOR1Q9UKL0 485 aa19.46■□□□□ 0.71
SHMT2-225ENST00000556798 CUTAO60888 179 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 FGBP02675 491 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 SSBP05455 408 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHMT2-225ENST00000556798 EXOC8Q8IYI6 725 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 TDHQ8IZJ6 230 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
SHMT2-225ENST00000556798 PSPC1Q8WXF1 523 aaKnown RBP19.45■□□□□ 0.7
SHMT2-225ENST00000556798 SPATA32Q96LK8 384 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 NLRP4Q96MN2 994 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 AGO3Q9H9G7 860 aaKnown RBP19.45■□□□□ 0.7
SHMT2-225ENST00000556798 GPRC5CQ9NQ84 441 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
SHMT2-225ENST00000556798 PCDHA7Q9UN72 937 aa19.45■□□□□ 0.7
SHMT2-225ENST00000556798 SLC26A4O43511 780 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 CD52P31358 61 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 TXLNAP40222 546 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 PLEKHG4Q58EX7 1191 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 AXDND1Q5T1B0 1012 aaPredicted RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 CNKSR3Q6P9H4 555 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 DBF4BQ8NFT6 615 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 ASAP3Q8TDY4 903 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 TCP11Q8WWU5 503 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 PRPF31Q8WWY3 499 aaKnown RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 NLRP7Q8WX94 980 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 RNPC3Q96LT9 517 aaKnown RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 RUSC1Q9BVN2 902 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 IFIH1Q9BYX4 1025 aaKnown RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 POLR3FQ9H1D9 316 aaPredicted RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 ADAMTS10Q9H324 1103 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 GDPD2Q9HCC8 539 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 POLD4Q9HCU8 107 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 CXXC1Q9P0U4 656 aaPredicted RBP19.44■□□□□ 0.7
SHMT2-225ENST00000556798 COL4A3BPQ9Y5P4 624 aa19.44■□□□□ 0.7
SHMT2-225ENST00000556798 A0A087WZ62 844 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 GAS2O43903 313 aaKnown RBP19.43■□□□□ 0.7
SHMT2-225ENST00000556798 PLA2G4BP0C869 781 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 CYP11B2P19099 503 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 CRYBB1P53674 252 aaPredicted RBP19.43■□□□□ 0.7
SHMT2-225ENST00000556798 DHX8Q14562 1220 aaKnown RBP19.43■□□□□ 0.7
SHMT2-225ENST00000556798 FAM102BQ5T8I3 360 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 SHC4Q6S5L8 630 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 TSHZ1Q6ZSZ6 1077 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 SEPT8Q92599 483 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
SHMT2-225ENST00000556798 PANK2Q9BZ23 570 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 BLOC1S4Q9NUP1 217 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 CCDC39Q9UFE4 941 aa19.43■□□□□ 0.7
SHMT2-225ENST00000556798 NOC2LQ9Y3T9 749 aaKnown RBP19.43■□□□□ 0.7
SHMT2-225ENST00000556798 A0A087X0B3 334 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 ZBBXA8MT70 800 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 SRGAP2CP0DJJ0 459 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 ACTN1P12814 892 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 ARL2P36404 184 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 SLC12A3P55017 1021 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 LAMTOR4Q0VGL1 99 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 PAK2Q13177 524 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 PDILTQ8N807 584 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 MCPH1Q8NEM0 835 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 HERVK_113Q902F9 699 aa19.42■□□□□ 0.7
SHMT2-225ENST00000556798 CSDE1O75534 798 aaKnown RBP19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RPS6KA5O75582 802 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 FGFR4P22455 802 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 GLRA2P23416 452 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RAD51AP2Q09MP3 1159 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 MCM6Q14566 821 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RRAGBQ5VZM2 374 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RINT1Q6NUQ1 792 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 FAM228AQ86W67 206 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 SYT2Q8N9I0 419 aaPredicted RBP19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RNF149Q8NC42 400 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 RAD54LQ92698 747 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 SCAND2PQ9GZW5 306 aaPredicted RBP19.41■□□□□ 0.7
SHMT2-225ENST00000556798 CHMP5Q9NZZ3 219 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 PADI3Q9ULW8 664 aa19.41■□□□□ 0.7
SHMT2-225ENST00000556798 LAMA2P24043 3122 aaKnown RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 DARSP14868 501 aaKnown RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 EIF4BP23588 611 aaKnown RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 NFX1Q12986 1120 aaKnown RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 CAPSQ13938 189 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 NAALADL2Q58DX5 795 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 C1orf186Q6ZWK4 172 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 ZNF410Q86VK4 478 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 KCTD17Q8N5Z5 321 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 USP38Q8NB14 1042 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 BSNDQ8WZ55 320 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms