RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 SLC39A14Q15043 492 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 HYIQ5T013 277 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 RHPN2Q8IUC4 686 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 PSPC1Q8WXF1 523 aaKnown RBP27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 ZNF668Q96K58 619 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 SCLT1Q96NL6 688 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 ARHGEF35A5YM69 484 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 USO1O60763 962 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 RPS6KA5O75582 802 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 EIF4BP23588 611 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 ODR4Q5SWX8 454 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 NLRP7Q8WX94 980 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 ERVK-5Q9HDB9 667 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 FBXO2Q9UK22 296 aaPredicted RBP27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 SRPRBQ9Y5M8 271 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 COL4A3BPQ9Y5P4 624 aa27.35■■□□□ 1.97
SDR39U1-221ENST00000556707 SLC26A4O43511 780 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 BRD1O95696 1058 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 DARSP14868 501 aaKnown RBP27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 DEFB103AP81534 67 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 FAM43BQ6ZT52 329 aaPredicted RBP27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 CABP7Q86V35 215 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 ZNF410Q86VK4 478 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 PRPF31Q8WWY3 499 aaKnown RBP27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 FTHL17Q9BXU8 183 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 NT5C3AQ9H0P0 336 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 BHMT2Q9H2M3 363 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 TFIP11Q9UBB9 837 aaKnown RBP27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 DNM3Q9UQ16 869 aa27.34■■□□□ 1.97
SDR39U1-221ENST00000556707 GPR182O15218 404 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 ASAP2O43150 1006 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 UBA7P41226 1012 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 LAMTOR4Q0VGL1 99 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 NFX1Q12986 1120 aaKnown RBP27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 STK38Q15208 465 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 ZRSR1Q15695 479 aaKnown RBP27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 GPR153Q6NV75 609 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 PADI6Q6TGC4 694 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 FAM228AQ86W67 206 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 KSR1Q8IVT5 923 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 KCTD17Q8N5Z5 321 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 LINC00301Q8NCQ3 95 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 PNMA5Q96PV4 448 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 GCOM2Q9BZD3 368 aaPredicted RBP27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 ST3GAL5Q9UNP4 418 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 ZDHHC9Q9Y397 364 aa27.33■■□□□ 1.97
SDR39U1-221ENST00000556707 MYH11P35749 1972 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 A0A087WZ62 844 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 EYA4O95677 639 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 AMHP03971 560 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 GRB10Q13322 594 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 ATL3Q6DD88 541 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 KCNK18Q7Z418 384 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 HERC6Q8IVU3 1022 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 MCPH1Q8NEM0 835 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 CDK5RAP3Q96JB5 506 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 NLRP4Q96MN2 994 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 FDXACB1Q9BRP7 624 aaPredicted RBP27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 CSRNP2Q9H175 543 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 SZT2Q5T011 3432 aa27.32■■□□□ 1.96
SDR39U1-221ENST00000556707 E9PMD0 336 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 YEATS4O95619 227 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 CYP11B2P19099 503 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 ARL2P36404 184 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 MXD4Q14582 209 aaPredicted RBP27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 FOXD4L6Q3SYB3 417 aaPredicted RBP27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 TMEM119Q4V9L6 283 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 FOXD4L3Q6VB84 417 aaPredicted RBP27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 PBX4Q9BYU1 374 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 TMX1Q9H3N1 280 aa27.31■■□□□ 1.96
SDR39U1-221ENST00000556707 ENPP3O14638 875 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 DNAJB2P25686 324 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 PBX2P40425 430 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 RABGGTBP53611 331 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 RAB30Q15771 203 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 MYOCDQ8IZQ8 938 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 KRI1Q8N9T8 703 aaKnown RBP27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 LINC01599Q8WXQ3 324 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 CALML4Q96GE6 196 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 CLIC6Q96NY7 704 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 PLIN2Q99541 437 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 INO80BQ9C086 356 aaPredicted RBP27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 CCSER1Q9C0I3 900 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 TSPYL2Q9H2G4 693 aaPredicted RBP27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 IFT122Q9HBG6 1241 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 DAXXQ9UER7 740 aaPredicted RBP27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 MSRAQ9UJ68 235 aa27.3■■□□□ 1.96
SDR39U1-221ENST00000556707 SPTLC2O15270 562 aa27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 SRGAP2CP0DJJ0 459 aa27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 TMCO2Q7Z6W1 182 aaPredicted RBP27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 RTN4RL1Q86UN2 441 aaPredicted RBP27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 ASAP3Q8TDY4 903 aa27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 POLR3FQ9H1D9 316 aaPredicted RBP27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 PCDHA11Q9Y5I1 949 aa27.29■■□□□ 1.96
SDR39U1-221ENST00000556707 CSDE1O75534 798 aaKnown RBP27.28■■□□□ 1.96
SDR39U1-221ENST00000556707 SPECC1Q5M775 1068 aa27.28■■□□□ 1.96
SDR39U1-221ENST00000556707 MAEAQ7L5Y9 396 aa27.28■■□□□ 1.96
SDR39U1-221ENST00000556707 RNF149Q8NC42 400 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms