RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 NXPE3Q969Y0 559 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 GMCL1Q96IK5 515 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 ZNF512BQ96KM6 892 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-242ENST00000556644 FTHL17Q9BXU8 183 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 ZBP1Q9H171 429 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 RANBP17Q9H2T7 1088 aaKnown RBP4.98□□□□□ -1.61
ATXN3-242ENST00000556644 CHRDQ9H2X0 955 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 MRS2Q9HD23 443 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 MAN1C1Q9NR34 630 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 HEBP1Q9NRV9 189 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 ATP8A2Q9NTI2 1148 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 C2orf42Q9NWW7 574 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 PTPRQQ9UMZ3 2332 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 C2CD3Q4AC94 2353 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
ATXN3-242ENST00000556644 PTPRCP08575 1304 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 CCDC171Q6TFL3 1326 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 UBR5O95071 2799 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 SHROOM3Q8TF72 1996 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PNMA6EA0A0J9YXQ4 647 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 CCDC195A0A1B0GUA6 201 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 DENND3A2RUS2 1198 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 INPPL1O15357 1258 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 IGSF3O75054 1194 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 MYCLP12524 364 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 CSRP1P21291 193 aaKnown RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 KLRC2P26717 231 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 CXCL12P48061 93 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PXNP49023 591 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 CCR3P51677 355 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 IGBP1P78318 339 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PPP2R5DQ14738 602 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PLA2G2CQ5R387 149 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 RCSD1Q6JBY9 416 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 C15orf39Q6ZRI6 1047 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 RSPH3Q86UC2 560 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 LONP2Q86WA8 852 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 LRRC43Q8N309 656 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 RNF169Q8NCN4 708 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PIP4K2CQ8TBX8 421 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 BCL7CQ8WUZ0 217 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 DDRGK1Q96HY6 314 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 ARID3AQ99856 593 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 ADAM2Q99965 735 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 KRTAP3-3Q9BYR6 98 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 MLXIPQ9HAP2 919 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 PIDD1Q9HB75 910 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 ATP6V0A4Q9HBG4 840 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 GPCPD1Q9NPB8 672 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 RNF19AQ9NV58 838 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 GINS2Q9Y248 185 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 SLC4A4Q9Y6R1 1079 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 KIAA1217Q5T5P2 1943 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 URB1O60287 2271 aaKnown RBP4.97□□□□□ -1.61
ATXN3-242ENST00000556644 DOPEY2Q9Y3R5 2298 aa4.97□□□□□ -1.61
ATXN3-242ENST00000556644 LNP1A1A4G5 178 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 K7ESF4 209 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TK2O00142 265 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 GOLIM4O00461 696 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 NOP56O00567 594 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 NMT2O60551 498 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 MARK3P27448 753 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 CLCN4P51793 760 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 NTHL1P78549 312 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 CFHR1Q03591 330 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 PPFIA1Q13136 1202 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 GAS6Q14393 721 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 BMS1Q14692 1282 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 COLEC12Q5KU26 742 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 ARHGEF16Q5VV41 709 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TAF2Q6P1X5 1199 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 ZNF852Q6ZMS4 543 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 FAM181AQ8N9Y4 354 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 SYTL5Q8TDW5 730 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 NSUN6Q8TEA1 469 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 SSH1Q8WYL5 1049 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 ZNF707Q96C28 371 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TMEM169Q96HH4 297 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 CASD1Q96PB1 797 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 PPP1R16BQ96T49 567 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 RMDN3Q96TC7 470 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 DNAJC2Q99543 621 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TMEM117Q9H0C3 514 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 LMAN1LQ9HAT1 526 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TMEM9BQ9NQ34 198 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 VPS45Q9NRW7 570 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TUBE1Q9UJT0 475 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 STX8Q9UNK0 236 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 MRPS17Q9Y2R5 130 aaKnown RBP4.96□□□□□ -1.62
ATXN3-242ENST00000556644 TRPV2Q9Y5S1 764 aa4.96□□□□□ -1.62
ATXN3-242ENST00000556644 CREBBPQ92793 2442 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 F5P12259 2224 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PATE3B3GLJ2 98 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 C9IYK1 514 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 C2CD2LO14523 706 aa4.95□□□□□ -1.62
ATXN3-242ENST00000556644 PLA2G6O60733 806 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms