RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ARID5AQ03989 594 aa20.07■□□□□ 0.8
SDR39U1-220ENST00000556548 ENOX2Q16206 610 aaKnown RBP20.07■□□□□ 0.8
SDR39U1-220ENST00000556548 OTUD6AQ7L8S5 288 aa20.07■□□□□ 0.8
SDR39U1-220ENST00000556548 HAUS6Q7Z4H7 955 aa20.07■□□□□ 0.8
SDR39U1-220ENST00000556548 METTL14Q9HCE5 456 aaKnown RBP20.07■□□□□ 0.8
SDR39U1-220ENST00000556548 UBE4BO95155 1302 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 OSBPP22059 807 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 EIF4A3P38919 411 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 MIS18BP1Q6P0N0 1132 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 FASTKD5Q7L8L6 764 aaKnown RBP20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 L2HGDHQ9H9P8 463 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 CEP72Q9P209 647 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 LOC285556D6RIA3 1793 aa20.06■□□□□ 0.8
SDR39U1-220ENST00000556548 EXOC3O60645 756 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 SLU7O95391 586 aaKnown RBP20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 PNMA8AQ86V59 439 aaPredicted RBP20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 SLC35F6Q8N357 371 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 BORCS6Q96GS4 357 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 DEF6Q9H4E7 631 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 FRMD4BQ9Y2L6 1034 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 RCCD1A6NED2 376 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 SUPT20HL2P0C7V6 817 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 TRIM49P0CI25 452 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 TRIM49CP0CI26 452 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 UBA1P22314 1058 aaKnown RBP20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 HNRNPH3P31942 346 aaKnown RBP20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 EXOC3L4Q17RC7 722 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 MTERF2Q49AM1 385 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 LDLRAD1Q5T700 205 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 CCDC170Q8IYT3 715 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 FAM133AQ8N9E0 248 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 ZSWIM2Q8NEG5 633 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 ACCSQ96QU6 501 aa20.05■□□□□ 0.8
SDR39U1-220ENST00000556548 ZNF263O14978 683 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 ZNF710Q8N1W2 664 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 BSNDQ8WZ55 320 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 CBWD1Q9BRT8 395 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 DMAC2Q9NW81 257 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 A0A0G2JMZ2 1700 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 LOXHD1Q8IVV2 1947 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 IPO7O95373 1038 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 PON1P27169 355 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 ICAM3P32942 547 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 NPTX2P47972 431 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 KRT83P78385 493 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 SNAPC2Q13487 334 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 RAPGEF1Q13905 1077 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 LY6KQ17RY6 165 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 TDRD12Q587J7 1177 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 CCDC122Q5T0U0 273 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 ILDR2Q71H61 639 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 LACRTQ9GZZ8 138 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 GANQ9H2C0 597 aa20.04■□□□□ 0.8
SDR39U1-220ENST00000556548 EIF3CLB5ME19 914 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 TLR2O60603 784 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 ATP4AP20648 1035 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 CDK17Q00537 523 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 SFMBT2Q5VUG0 894 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 EIF3CQ99613 913 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 ZNF302Q9NR11 478 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 CYP26B1Q9NR63 512 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 GCNT4Q9P109 453 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 DUSP10Q9Y6W6 482 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 SYNGAP1Q96PV0 1343 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 PCNTO95613 3336 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 AKR1B10O60218 316 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 SLC25A27O95847 323 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 KIF11P52732 1056 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 NCBP1Q09161 790 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 NFIL3Q16649 462 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 GJB7Q6PEY0 223 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 MMP19Q99542 508 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 EDEM3Q9BZQ6 932 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 MAF1Q9H063 256 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 TMEM206Q9H813 350 aa20.03■□□□□ 0.8
SDR39U1-220ENST00000556548 GRIN3BO60391 1043 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 MAPTP10636 758 aaKnown RBP20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 EDNRBP24530 442 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 NCKAP1LP55160 1127 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 GTF2BQ00403 316 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 DMP1Q13316 513 aaPredicted RBP20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 HGSNATQ68CP4 663 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 GOLGA5Q8TBA6 731 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 JAKMIP2Q96AA8 810 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 TIPINQ9BVW5 301 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 KMT5AQ9NQR1 393 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 FHOD1Q9Y613 1164 aa20.02■□□□□ 0.8
SDR39U1-220ENST00000556548 DKC1O60832 514 aaKnown RBP eCLIP20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 KCTD2Q14681 263 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 SPA17Q15506 151 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 DPY19L2P1Q6NXN4 242 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 GBP6Q6ZN66 633 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 TMEM161BQ8NDZ6 487 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 CARD6Q9BX69 1037 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 PORCNQ9H237 461 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 EFCC1Q9HA90 598 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 XPNPEP1Q9NQW7 623 aa20.02■□□□□ 0.79
SDR39U1-220ENST00000556548 DENND3A2RUS2 1198 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms