RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 NSUN4Q96CB9 384 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 DNAJC19Q96DA6 116 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 TMEM109Q9BVC6 243 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ATP8A2Q9NTI2 1148 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 FERP16591 822 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 IL6STP40189 918 aaPredicted RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 PRKCIP41743 596 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 EIF3BP55884 814 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 CHRNDQ07001 517 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 HIC1Q14526 733 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 SUSD4Q5VX71 490 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 OLFML2BQ68BL8 750 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 DDX42Q86XP3 938 aaKnown RBP eCLIP9.27□□□□□ -0.93
MARK3-210ENST00000556463 MGARPQ8TDB4 240 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 FBF1Q8TES7 1133 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 AGAP11Q8TF27 550 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 TBC1D5Q92609 795 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 DDX17Q92841 729 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 HES6Q96HZ4 224 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 SWAP70Q9UH65 585 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 NOVP48745 357 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 MAGOHP61326 146 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 SDCCAG8Q86SQ7 713 aaPredicted RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 CCHCR1Q8TD31 782 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 MAGOHBQ96A72 148 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 KLHL29Q96CT2 875 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 FGD4Q96M96 766 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 LNPEPQ9UIQ6 1025 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 NOVA2Q9UNW9 492 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 COL4A3BPQ9Y5P4 624 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 CDK5RAP2Q96SN8 1893 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 DPPA5A6NC42 116 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 LIN7AO14910 233 aaPredicted RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 DRG2P55039 364 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 PDIA5Q14554 519 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 MUM1Q2TAK8 710 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 KBTBD12Q3ZCT8 623 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 FAM47AQ5JRC9 791 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 METTL13Q8N6R0 699 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 MIPOL1Q8TD10 442 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 ELAC2Q9BQ52 826 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 DDX23Q9BUQ8 820 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 IQCGQ9H095 443 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 LUC7LQ9NQ29 371 aaKnown RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 GALNT8Q9NY28 637 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 TMOD3Q9NYL9 352 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 ARPP21Q9UBL0 812 aaPredicted RBP9.26□□□□□ -0.93
MARK3-210ENST00000556463 NHSQ6T4R5 1651 aa9.26□□□□□ -0.93
MARK3-210ENST00000556463 ANKRD33BA6NCL7 494 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SMARCA1P28370 1054 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 GNAQP50148 359 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 FKBP3Q00688 224 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 HYIQ5T013 277 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 OLFML1Q6UWY5 402 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SV2BQ7L1I2 683 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 PTF1AQ7RTS3 328 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 KRT25Q7Z3Z0 450 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 WDR66Q8TBY9 1149 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 RAD54LQ92698 747 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 GORASP1Q9BQQ3 440 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SPZ1Q9BXG8 430 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 KCTD10Q9H3F6 313 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 PANK4Q9NVE7 773 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 INTUQ9ULD6 942 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ZBTB1Q9Y2K1 713 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ESYT2A0FGR8 921 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 PGRMC1O00264 195 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 SEPT2Q15019 361 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 RPS6KA1Q15418 735 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 KIAA0753Q2KHM9 967 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 Q4G0T1 1027 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 DUPD1Q68J44 220 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ACSBG1Q96GR2 724 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 RBM41Q96IZ5 413 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 TRIM31Q9BZY9 425 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 HOMER3Q9NSC5 361 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 BLOC1S6Q9UL45 172 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 NOC2LQ9Y3T9 749 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 COQ9O75208 318 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ROR2Q01974 943 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 KLRC3Q07444 240 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 UBE4AQ14139 1066 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SLMAPQ14BN4 828 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ZNF365Q70YC5 407 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 ZNF571Q7Z3V5 609 aaPredicted RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 FBXO33Q7Z6M2 555 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 TMCO5AQ8N6Q1 288 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SREK1Q8WXA9 508 aaKnown RBP9.25□□□□□ -0.93
MARK3-210ENST00000556463 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 SAMD15Q9P1V8 674 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms