RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 EPCAMP16422 314 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 AOC1P19801 751 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 CEP55Q53EZ4 464 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 MIS18BP1Q6P0N0 1132 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 ECHDC2Q86YB7 292 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 CCDC60Q8IWA6 550 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-219ENST00000556432 MB21D2Q8IYB1 491 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-219ENST00000556432 VPS52Q8N1B4 723 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 HELQQ8TDG4 1101 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 MAP7D2Q96T17 732 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 RTP3Q9BQQ7 232 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 DMDP11532 3685 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 EVPLQ92817 2033 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 MED19A0JLT2 244 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-219ENST00000556432 ZC3H11AO75152 810 aaKnown RBP eCLIP15.83■□□□□ 0.12
ACTN1-219ENST00000556432 GPR32O75388 356 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 ATG7O95352 703 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 CLCN3P51790 818 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 TDGQ13569 410 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 CLLU1OSQ5K130 101 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 SWSAP1Q6NVH7 229 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 ABHD15Q6UXT9 468 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 CCDC149Q6ZUS6 474 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 OTOP3Q7RTS5 596 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 KIAA2013Q8IYS2 634 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 RMDN1Q96DB5 314 aa15.83■□□□□ 0.12
ACTN1-219ENST00000556432 MRPL9Q9BYD2 267 aaKnown RBP15.83■□□□□ 0.12
ACTN1-219ENST00000556432 CACNA1BQ00975 2339 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 NCOR2Q9Y618 2525 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 IGKV6D-21A0A0A0MT36 114 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 ZBTB42B2RXF5 422 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 PRC1O43663 620 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 LMNAP02545 664 aaKnown RBP15.82■□□□□ 0.12
ACTN1-219ENST00000556432 NAPAP54920 295 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 BCAR1P56945 870 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 NLRP11P59045 1033 aaKnown RBP15.82■□□□□ 0.12
ACTN1-219ENST00000556432 ZNF668Q96K58 619 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-219ENST00000556432 ANO3Q9BYT9 981 aa15.82■□□□□ 0.12
ACTN1-219ENST00000556432 CALM1P0DP23 149 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 CALM2P0DP24 149 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 CALM3P0DP25 149 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 NPR3P17342 541 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-219ENST00000556432 ZBP1Q9H171 429 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 SFXN1Q9H9B4 322 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 DUSP12Q9UNI6 340 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 R4GN57 208 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 DMXL1Q9Y485 3027 aa15.81■□□□□ 0.12
ACTN1-219ENST00000556432 MEIS1O00470 390 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 FOSP01100 380 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-219ENST00000556432 EIF4BP23588 611 aaKnown RBP15.8■□□□□ 0.12
ACTN1-219ENST00000556432 TMOD1P28289 359 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 ADCY7P51828 1080 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 GIT2Q14161 759 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 WWC2Q6AWC2 1192 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 TMTC3Q6ZXV5 915 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 PLA2G4DQ86XP0 818 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 TMTC2Q8N394 836 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 LRRC71Q8N4P6 559 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 RIN2Q8WYP3 895 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-219ENST00000556432 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 CEP131Q9UPN4 1083 aa15.8■□□□□ 0.12
ACTN1-219ENST00000556432 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-219ENST00000556432 MAGEB2O15479 319 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 CFHP08603 1231 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 FGFR4P22455 802 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 MCM5P33992 734 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 EFCAB12Q6NXP0 572 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 PPFIBP1Q86W92 1011 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-219ENST00000556432 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 FEZF2Q8TBJ5 459 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 ADAMTS10Q9H324 1103 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 RIC8AQ9NPQ8 531 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 DACT1Q9NYF0 836 aa15.79■□□□□ 0.12
ACTN1-219ENST00000556432 EPG5Q9HCE0 2579 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 IPO5O00410 1097 aaKnown RBP15.78■□□□□ 0.12
ACTN1-219ENST00000556432 IGHDP01880 384 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 CTSAP10619 480 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 ATP4AP20648 1035 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 SREBF1P36956 1147 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-219ENST00000556432 RNASELQ05823 741 aaKnown RBP15.78■□□□□ 0.12
ACTN1-219ENST00000556432 LONRF3Q496Y0 759 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 SPECC1Q5M775 1068 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 NIPA1Q7RTP0 329 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 GPR149Q86SP6 731 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
ACTN1-219ENST00000556432 SLC22A17Q8WUG5 538 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 NLRP7Q8WX94 980 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 GBP3Q9H0R5 595 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 CA14Q9ULX7 337 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 INPP5FQ9Y2H2 1132 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
ACTN1-219ENST00000556432 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 NARSO43776 548 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms