RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
ACTN1-217ENST00000556203 LRWD1Q9UFC0 647 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 INSL6Q9Y581 213 aa16.95■□□□□ 0.3
ACTN1-217ENST00000556203 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 A0A087WZ62 844 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 MGEA5O60502 916 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 XRCC6P12956 609 aaKnown RBP eCLIP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 CCT6AP40227 531 aaKnown RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 TAP1Q03518 808 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 PDIA5Q14554 519 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 KSR1Q8IVT5 923 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 PSPC1Q8WXF1 523 aaKnown RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 YME1L1Q96TA2 773 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 FDXACB1Q9BRP7 624 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 GCOM2Q9BZD3 368 aaPredicted RBP16.94■□□□□ 0.3
ACTN1-217ENST00000556203 PRDM12Q9H4Q4 367 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 CERS4Q9HA82 394 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 ATP6V0A4Q9HBG4 840 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
ACTN1-217ENST00000556203 DENND3A2RUS2 1198 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 PP2D1A8MPX8 630 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 DGAT1O75907 488 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 FGFR4P22455 802 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 HTRA4P83105 476 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-217ENST00000556203 ZNF410Q86VK4 478 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 SNX29Q8TEQ0 813 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 TCP11Q8WWU5 503 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 ADAM2Q99965 735 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 XPNPEP1Q9NQW7 623 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 COL4A3BPQ9Y5P4 624 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 STK24Q9Y6E0 443 aa16.93■□□□□ 0.3
ACTN1-217ENST00000556203 LINC01553A4QN01 128 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 USO1O60763 962 aaKnown RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 CSDE1O75534 798 aaKnown RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 FOSL2P15408 326 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 RESTQ13127 1097 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 ECM1Q16610 540 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 FAM43BQ6ZT52 329 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 PRPF31Q8WWY3 499 aaKnown RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 ARNTL2Q8WYA1 636 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 RGS18Q9NS28 235 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 DBR1Q9UK59 544 aaKnown RBP16.92■□□□□ 0.3
ACTN1-217ENST00000556203 MICAL3Q7RTP6 2002 aa16.92■□□□□ 0.3
ACTN1-217ENST00000556203 EVPLQ92817 2033 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 STX6O43752 255 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 SRGAP2CP0DJJ0 459 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 MUTP22033 750 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 CDC25AP30304 524 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 LAMTOR4Q0VGL1 99 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 ARL6IP4Q66PJ3 421 aaKnown RBP16.91■□□□□ 0.3
ACTN1-217ENST00000556203 NPAS4Q8IUM7 802 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-217ENST00000556203 INO80BQ9C086 356 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-217ENST00000556203 KIAA1024Q9UPX6 916 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 PTPRSQ13332 1948 aa16.91■□□□□ 0.3
ACTN1-217ENST00000556203 ARHGEF35A5YM69 484 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 EPOPA6NHQ4 379 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 BMP15O95972 392 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 STAG3L1P0CL83 205 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 ZSCAN20P17040 1043 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 29
ACTN1-217ENST00000556203 SARSP49591 514 aaKnown RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 DSC3Q14574 896 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 SF3A1Q15459 793 aaKnown RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 CRIPAKQ8N1N5 446 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 RNF149Q8NC42 400 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 ASAP3Q8TDY4 903 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 TGS1Q96RS0 853 aaKnown RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 GAS2L1Q99501 681 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 DDX19AQ9NUU7 478 aaKnown RBP16.9■□□□□ 0.3
ACTN1-217ENST00000556203 MTUS1Q9ULD2 1270 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 LRFN2Q9ULH4 789 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 GBF1Q92538 1859 aa16.9■□□□□ 0.3
ACTN1-217ENST00000556203 C9IYK1 514 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 RFXAPO00287 272 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 ASAP2O43150 1006 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 DGKIO75912 1065 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 ARL2P36404 184 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 ADGRE1Q14246 886 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 MXD4Q14582 209 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-217ENST00000556203 ZRSR1Q15695 479 aaKnown RBP16.89■□□□□ 0.29
ACTN1-217ENST00000556203 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 PADI6Q6TGC4 694 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms